Factsheet for PGSC0003DMT400001650

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
vacuole 2
plastid 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g116620.2.1	Tomato	plastid	95.31	95.31
PGSC0003DMT400073469	Potato	cytosol	81.13	81.33
KRH44445	Soybean	cytosol	75.46	77.67
KRH47460	Soybean	cytosol	77.19	77.38
VIT_09s0002g06760.t01	Wine grape	cytosol	76.94	76.85
KRH23570	Soybean	endoplasmic reticulum	75.96	76.33
CDY20149	Canola	cytosol, nucleus, peroxisome	19.85	75.59
CDY21865	Canola	cytosol	75.34	75.25
AT1G52570.1	Thale cress	cytosol	74.85	74.94
AT3G15730.1	Thale cress	cytosol	74.85	74.94
CDX97705	Canola	cytosol	74.72	74.81
Bra027209.1-P	Field mustard	cytosol	74.72	74.81
Bra021132.1-P	Field mustard	cytosol	74.85	74.75
Bra040960.1-P	Field mustard	cytosol	74.72	74.63
CDY30108	Canola	cytosol	74.48	74.57
CDY47540	Canola	cytosol	74.6	74.51
CDY60551	Canola	cytosol	73.86	73.77
Bra030375.1-P	Field mustard	cytosol	73.86	73.77
PGSC0003DMT400024828	Potato	cytosol	11.47	73.23
CDY63527	Canola	cytosol	29.96	72.75
PGSC0003DMT400024831	Potato	extracellular	72.38	72.74
CDX87920	Canola	cytosol	29.84	70.55
CDY20148	Canola	cytosol, peroxisome, plastid	34.53	70.18
PGSC0003DMT400020297	Potato	cytosol	61.04	60.44
PGSC0003DMT400006661	Potato	cytosol	36.25	51.13
PGSC0003DMT400009253	Potato	cytosol	15.91	49.43
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	18.37	48.69
PGSC0003DMT400000378	Potato	cytosol	15.54	48.09
PGSC0003DMT400025590	Potato	cytosol	45.25	45.25
PGSC0003DMT400058531	Potato	plastid	45.62	43.58
PGSC0003DMT400011523	Potato	cytosol	45.5	43.11
PGSC0003DMT400009250	Potato	cytosol	24.66	36.17

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:102597936	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M0ZIV2	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	EnsemblPlantsGene:PGSC0003DMG400000614	PGSC:PGSC0003DMG400000614	EnsemblPlants:PGSC0003DMT400001650	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI00029627EB	RefSeq:XP_006364210.1

Description

Phospholipase PLDa1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000614]

Coordinates

chr3:+:56435683..56440302

Molecular Weight (calculated)

92749.5 Da

IEP (calculated)

5.128

GRAVY (calculated)

-0.526

Length

811 amino acids

Sequence
(BLAST)

001: MAPILLHGTL HVTIHEVDRL HGKHGRNFFS KIKDSVEETV GMGKGASRIY ATVDLEKARV GRTRVIENEP NNPRWYESFH IYCAHMAKNV IFTVKDNNSI
101: GATLIGRAYL PVNDLLEGEE VDEWIEILDE DENPIEAGSK IHVTLQYFEI SRDRNWGRGI GSSKYPGVPY TFFPQRTGCR VSLYQDAHIP DKFIPKIPLS
201: GGKYYEPHRC WEDIFDAITN AKHMIYITGW SVYTEITLLR DSRREKPGGD DSVGELLKKK AKEGVKVLML VWDDRTSVRL LKKDGLMATH DEETEEYFKD
301: TDVHCVLCPR DPDDGGSIVK DLQTSAMFTH HQKIVIVDTD MPNGESETRR LMSFVGGLDL CDGRYDTPFH SLFRTLDTAH HDDFHQPNFA EASIDKGGPR
401: EPWHDIHSRV EGPIAWDVLY NFEQRWRKQG GKDILVDLRE LDNVIIPPSS VMYPDDTESW NVQLFRSIDG GAAFGFPDTP EESVKAGLVS GKNNIVDRSI
501: QDAYITAIRR AKNFIYIENQ YFLGSCYDWE CDDVKVEEVG ALHLIPKELT LKIVSKIEAG ERFTVYVLVP MWPEGLPDSA SVQAILDWQR RTMEMMYKHI
601: FQAIRDQGLD DHPRNYLTFF CIGNREVKKS GEYEPSDKPE SDTDYERAQE ARRFMIYVHS KMMIVDDEYI IVGSANINQR SMDGARDSEI AIGAYQPHNL
701: TTSRQPARGQ VHGFRMALWY EHMGMLDDTF QHPESEDCVR KVNEIADKYW DLYTSERLET DLPGHLLRYP IGLTNDGEIT DLPGNGNEYF PDTKAKVVGT
801: KSDLLPPILT T

Best Arabidopsis Sequence Match ( AT1G52570.2 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.