CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87920	Canola	cytosol	64.91	75.51
CDY63527	Canola	cytosol	62.66	74.85
Bra021132.1-P	Field mustard	cytosol	93.23	45.81
CDY21865	Canola	cytosol	91.48	44.95
CDY30108	Canola	cytosol	84.71	41.73
AT3G15730.1	Thale cress	cytosol	84.46	41.6
CDX97705	Canola	cytosol	84.21	41.48
KRH09735	Soybean	cytosol	43.86	37.72
CDY60551	Canola	cytosol	76.69	37.68
CDY47540	Canola	cytosol	76.19	37.44
CDX80734	Canola	cytosol	11.03	36.36
VIT_09s0002g06760.t01	Wine grape	cytosol	72.68	35.71
PGSC0003DMT400073469	Potato	cytosol	71.93	35.48
Os01t0172400-03	Rice	plastid	72.18	35.47
KXG31749	Sorghum	cytosol	71.18	34.98
Solyc06g068090.2.1	Tomato	plastid	70.68	34.86
Zm00001d008727_P002	Maize	cytosol	70.93	34.85
Zm00001d039670_P004	Maize	cytosol	70.68	34.73
PGSC0003DMT400001650	Potato	cytosol, plastid	70.18	34.53
TraesCS3A01G130000.1	Wheat	plastid	70.18	34.48
TraesCS3D01G130900.1	Wheat	golgi	69.92	34.36
TraesCS3B01G149100.1	Wheat	unclear	69.92	34.36
HORVU3Hr1G024530.2	Barley	plastid	69.67	34.24
Solyc03g116620.2.1	Tomato	plastid	69.42	34.16
EES17463	Sorghum	cytosol	69.42	34.07
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	58.4	32.77
CDY13284	Canola	cytosol	36.59	31.81
GSMUA_Achr7P10170_001	Banana	cytosol	42.61	31.48
OQU77524	Sorghum	plastid	64.66	31.43
GSMUA_Achr10P...	Banana	cytosol, plastid	35.59	31.07
Os05t0171000-01	Rice	plasma membrane	63.16	30.58
TraesCS1A01G115300.1	Wheat	cytosol	62.16	30.43
TraesCS1D01G116700.1	Wheat	cytosol	61.9	30.31
TraesCS1B01G135200.1	Wheat	cytosol	59.9	29.22
HORVU1Hr1G025370.1	Barley	cytosol	62.41	29.12
Zm00001d037643_P001	Maize	cytosol	63.41	27.92
CDY05490	Canola	cytosol	55.89	27.36
CDY05351	Canola	cytosol	54.89	26.87
CDX80505	Canola	cytosol	51.38	26.28
CDX88175	Canola	cytosol	48.12	25.91
CDY35793	Canola	cytosol	41.6	19.19
CDX72557	Canola	cytosol	41.35	19.08
CDY64184	Canola	mitochondrion	38.85	19.02
CDY47037	Canola	cytosol	41.35	18.64
CDX90807	Canola	cytosol	37.09	18.34
CDX86742	Canola	cytosol	38.85	18.3
CDY41630	Canola	cytosol	39.1	17.99
CDY67335	Canola	cytosol	38.6	17.78
CDX90808	Canola	cytosol	34.84	17.51
CDY33065	Canola	cytosol	32.58	17.15
CDY24051	Canola	cytosol	31.83	16.75
CDX90066	Canola	cytosol	40.35	16.53
CDY52961	Canola	cytosol, nucleus, peroxisome	40.35	16.23
CDY54926	Canola	cytosol, nucleus, peroxisome	40.35	16.05
CDY15144	Canola	peroxisome	40.35	15.13
CDY51545	Canola	cytosol	3.26	9.09
CDY18811	Canola	cytosol, nucleus, peroxisome	22.31	8.5
CDY42882	Canola	nucleus	6.52	8.07
CDX92096	Canola	nucleus	20.3	7.49
CDY51604	Canola	cytosol	5.26	7.45
CDX95904	Canola	cytosol, nucleus, peroxisome	20.3	7.44
CDY28756	Canola	cytosol, extracellular	1.25	3.97
CDY20149	Canola	cytosol, nucleus, peroxisome	1.75	3.29
CDY41006	Canola	mitochondrion	1.25	3.21
CDY13283	Canola	mitochondrion	2.51	2.83
CDY70643	Canola	cytosol, peroxisome	1.5	2.82
CDY46254	Canola	cytosol	0.5	2.06

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:50.3.1	GO:A0A078G696
UniProt:A0A078G696	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY20148	ProteinID:CDY20148	ProteinID:CDY20148.1
GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00010014001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00614	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF109	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI0004EEC75A	:	:	:	:

Description

BnaA01g28540DBnaA01g28540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G696]

Coordinates

chrLK032103:+:405057..406958

Molecular Weight (calculated)

44686.5 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.228

Length

399 amino acids

Sequence
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HTGGLSSGFL GKIRANVEEA IGFGKGETQL YATIDLQKAR VGRTRKITDE PKNPKWYESF HIYCAHMASD IIFTVKDDNP
101: IGATLIGRAY VPVDEVINGE EVEKWVEILD NDRNPIHGES KIHVKLQYFG VETDRNWNMG VKSAKFPGVP YTFFSQRQGC RVSLYQGAHV PDNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEITLV RDSRRPKPGG DMTLGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEDTENYFN
301: GSEVHCVLCP LSAMFTHHQK IVVVDSEMRR IMSFVGGIDL CDGRYDTPFH SLFRTLDTVV LGSLGRTSTL VSKVLSLGMC CTTSSRDGAS KVVKTFWLS

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.