CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	64.81	99.43
CDY64184	Canola	mitochondrion	85.25	84.42
CDY13283	Canola	mitochondrion	35.56	81.3
CDX90808	Canola	cytosol	77.82	79.09
CDY51545	Canola	cytosol	14.0	79.02
CDY41006	Canola	mitochondrion	14.87	76.92
CDX86742	Canola	cytosol	80.17	76.39
CDY28756	Canola	cytosol, extracellular	11.77	75.4
CDY46254	Canola	cytosol	9.05	75.26
CDY13284	Canola	cytosol	40.15	70.59
TraesCS1B01G195200.1	Wheat	cytosol	63.57	63.33
TraesCS1D01G189300.1	Wheat	cytosol	63.57	63.33
Solyc08g080130.2.1	Tomato	nucleus	65.68	62.65
VIT_02s0025g04620.t01	Wine grape	cytosol	65.92	62.59
PGSC0003DMT400058531	Potato	plastid	65.55	62.31
KRH77467	Soybean	nucleus	65.8	62.25
KRH77469	Soybean	nucleus	5.33	61.43
KRH77470	Soybean	cytosol	10.29	60.58
TraesCS1A01G365100.2	Wheat	mitochondrion	61.96	60.39
GSMUA_Achr8P12030_001	Banana	plastid	60.1	60.32
Os03t0119100-01	Rice	plasma membrane	61.96	59.88
KXG40331	Sorghum	cytosol	61.21	59.81
TraesCS1D01G370600.1	Wheat	cytosol	61.34	59.78
TraesCS1B01G382600.1	Wheat	mitochondrion	61.34	59.78
HORVU1Hr1G079150.1	Barley	cytosol	60.97	59.42
Zm00001d027386_P002	Maize	cytosol	60.97	58.99
HORVU4Hr1G085550.2	Barley	cytosol	60.47	58.72
TraesCS4D01G346700.1	Wheat	cytosol	60.35	58.6
TraesCS5A01G520900.1	Wheat	cytosol	59.85	58.12
KRG93706	Soybean	nucleus	20.69	57.39
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	62.08	56.61
TraesCS4B01G352300.1	Wheat	cytosol	59.85	56.36
Zm00001d050470_P001	Maize	mitochondrion	27.39	55.53
CDX90066	Canola	cytosol	66.42	55.03
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	18.59	54.15
CDY52961	Canola	cytosol, nucleus, peroxisome	64.81	52.72
CDY54926	Canola	cytosol, nucleus, peroxisome	64.81	52.14
GSMUA_Achr5P20150_001	Banana	cytosol	62.95	50.95
CDY15144	Canola	peroxisome	66.42	50.38
CDY67335	Canola	cytosol	53.28	49.65
Zm00001d015256_P001	Maize	cytosol	25.28	49.28
CDY41630	Canola	cytosol	52.66	49.02
Zm00001d029684_P001	Maize	peroxisome	63.44	48.85
EER92041	Sorghum	cytosol, nucleus, peroxisome	63.57	48.72
Os10t0524400-01	Rice	plasma membrane	63.07	48.66
CDX72557	Canola	cytosol	51.55	48.09
CDY47037	Canola	cytosol	51.92	47.34
TraesCS1A01G187400.1	Wheat	peroxisome	64.06	46.7
CDY35793	Canola	cytosol	49.81	46.47
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	63.69	46.35
CDY20149	Canola	cytosol, nucleus, peroxisome	11.65	44.13
CDX88175	Canola	cytosol	40.15	43.72
CDY70643	Canola	cytosol, peroxisome	11.52	43.66
CDY30108	Canola	cytosol	43.12	42.96
CDX80505	Canola	cytosol	41.51	42.95
CDX97705	Canola	cytosol	43.0	42.84
CDY47540	Canola	cytosol	43.0	42.73
CDY60551	Canola	cytosol	43.0	42.73
CDX80734	Canola	cytosol	6.32	42.15
CDY21865	Canola	cytosol	42.01	41.75
CDY05490	Canola	cytosol	41.51	41.1
CDY05351	Canola	cytosol	41.39	40.98
CDY24051	Canola	cytosol	36.06	38.39
CDY33065	Canola	cytosol	35.56	37.86
CDY20148	Canola	cytosol, peroxisome, plastid	18.34	37.09
CDY63527	Canola	cytosol	14.5	35.03
CDX87920	Canola	cytosol	14.87	34.99
CDY42882	Canola	nucleus	13.75	34.47
CDY18811	Canola	cytosol, nucleus, peroxisome	21.93	16.91
CDX92096	Canola	nucleus	22.55	16.82
CDX95904	Canola	cytosol, nucleus, peroxisome	22.43	16.64
CDY51604	Canola	cytosol	2.11	6.03

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	GO:A0A078DP95
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDX90807	ProteinID:CDX90807	ProteinID:CDX90807.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00151514001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EEAB9B
SEG:seg	:	:	:	:	:

Description

BnaA03g24870D

Coordinates

chrLK031864:-:635571..640917

Molecular Weight (calculated)

91444.1 Da

IEP (calculated)

7.899

GRAVY (calculated)

-0.417

Length

807 amino acids

Sequence
(BLAST)

001: MSMEGSSNAS LRVVLLHGNL DIWVKEAKNL PNMDRFRRYK KNSTSDPYVT VSIADAKIGT TFVIDNDENP VWMQHFYVPV AHHATVVKFV VKDNDRFGSR
101: SIGDVRIPTE ELFSGNRMEG LFPILNTSGK PCKKGAVLSL AIQYTPVEMM KIYQMGGGNE CEGVPGTYFP LRKGGRVTLY QDAHVEDGTL PRVDLDGGMQ
201: YIHGKCWEDM ADAIRQAKNL IYITGWSVYH PVRLVRRNND PTDGVLGDLL KEKSQEGVRV LLLVWDDPFS SSFMGHRTVI FLLTSDEEIR HFFKNSSVQV
301: IISPRSGGKG HHSFVKKTEV GTIYTHHQKT LIVDAEAAQG RRKIIAFVGG LDMCKGRFDT PNHPLFRTLK TLHKDDFHNP NFATSVDDGP RQPWHDLHSK
401: IDGPAAYDVL ANFGQRWLKA SEKRHRISIH RSSSEDALLK IDRISNIMGL SEASSVSDND PESWHVQVFR SLDSTSVKEF PKNSKEASGE NLLCGKNILV
501: DMSIHTAYVK AIRSAQHFIY IENQYFLGSS FNWHSHNDVG ANNLIPMEIA LKIASKIRAR EKFAAYIVIP MWPEGDPTSK GMQSILYWQY NTMQMMYQTI
601: YKALVEAELD GQYEPQDYLN FFCLGTREVA DGNVNNNAKE NPTQVQALKS RRFMIYVHSK GMVVDDEFVL IGSANINQRS LEGTRDTEIA MGGYQPQHSW
701: AKKGSRPCGQ IFGYRMSLWA EHLGFLEKSF EEPENMECVR RVRHLSELNW RQYAAKEVTE MTSHLLKYPV QVDRTGQVTS LPGCETFPDL GGKIIGTFHR
801: IKENLTI

Best Arabidopsis Sequence Match ( AT4G11850.1 )
(BLAST)

001: MAYHPAYTET MSMGGGSSHG GGQQYVPFAT SSGSLRVELL HGNLDIWVKE AKHLPNMDGF HNRLGGMLSG LGRKKVEGEK SSKITSDPYV TVSISGAVIG
101: RTFVISNSEN PVWMQHFDVP VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG LSIQYTPMER MRLYQMGVGS
201: GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG
301: VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF
401: DTPKHPLFRT LKTLHKDDFH NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL RIDRIPDIVG LSEASSANDN
501: DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA
601: REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK
701: SRRFMIYVHS KGMVVDDEFV LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG FEEPENMECV RRVRQLSELN
801: WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD LGGKIIGSFL ALQENLTI

Arabidopsis Description

PLDGAMMA1Phospholipase D gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T053]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.