Factsheet for Zm00001d050470_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT4G11850.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77469	Soybean	nucleus	9.55	54.29
KRG93706	Soybean	nucleus	36.18	49.48
Zm00001d027386_P002	Maize	cytosol	84.92	40.53
KXG40331	Sorghum	cytosol	82.16	39.59
Os03t0119100-01	Rice	plasma membrane	75.88	36.17
HORVU4Hr1G085550.2	Barley	cytosol	73.12	35.02
TraesCS4D01G346700.1	Wheat	cytosol	72.61	34.78
TraesCS5A01G520900.1	Wheat	cytosol	72.36	34.66
CDY13284	Canola	cytosol	39.7	34.42
Zm00001d015256_P001	Maize	cytosol	35.43	34.06
TraesCS4B01G352300.1	Wheat	cytosol	72.61	33.72
GSMUA_Achr8P12030_001	Banana	plastid	67.09	33.21
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	41.46	31.37
Bra014871.1-P	Field mustard	cytosol	61.56	28.93
CDX86742	Canola	cytosol	61.56	28.93
AT4G11850.1	Thale cress	cytosol	62.06	28.79
Solyc08g080130.2.1	Tomato	nucleus	60.55	28.49
PGSC0003DMT400058531	Potato	plastid	60.55	28.39
CDY41006	Canola	mitochondrion	11.06	28.21
VIT_02s0025g04620.t01	Wine grape	cytosol	59.55	27.88
AT4G11830.2	Thale cress	cytosol	59.55	27.69
Solyc01g091910.2.1	Tomato	plastid	62.06	27.6
AT4G11840.1	Thale cress	cytosol	59.8	27.48
CDX90807	Canola	cytosol	55.53	27.39
CDY64184	Canola	mitochondrion	55.78	27.24
CDX90808	Canola	cytosol	54.02	27.08
Bra000753.1-P	Field mustard	cytosol	54.02	27.08
Zm00001d029684_P001	Maize	peroxisome	70.6	26.81
KRH65182	Soybean	cytosol	50.75	26.61
KRH77467	Soybean	nucleus	57.04	26.61
AT4G00240.1	Thale cress	cytosol	61.31	26.32
GSMUA_Achr5P20150_001	Banana	cytosol	65.08	25.98
CDX90066	Canola	cytosol	62.81	25.67
CDY52961	Canola	cytosol, nucleus, peroxisome	61.56	24.7
CDY54926	Canola	cytosol, nucleus, peroxisome	61.81	24.53
Bra022740.1-P	Field mustard	cytosol, extracellular	7.54	23.81
CDY28756	Canola	cytosol, extracellular	7.54	23.81
CDY15144	Canola	peroxisome	62.81	23.5
Bra033225.1-P	Field mustard	cytosol	62.81	23.36
Zm00001d006257_P009	Maize	cytosol	49.25	22.9
KRH48290	Soybean	nucleus	60.05	22.83
KRH01625	Soybean	cytosol	61.56	22.33
AT2G42010.2	Thale cress	peroxisome	61.81	22.2
VIT_15s0048g01160.t01	Wine grape	cytosol	60.3	22.08
KRH70487	Soybean	cytosol	60.8	21.88
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	44.72	21.81
Zm00001d039670_P004	Maize	cytosol	43.97	21.55
Solyc10g017650.1.1	Tomato	cytosol	60.55	21.54
Zm00001d008727_P002	Maize	cytosol	42.71	20.94
Zm00001d022594_P002	Maize	cytosol	45.48	20.45
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	42.71	19.84
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	46.23	19.76
Zm00001d005484_P003	Maize	cytosol	41.46	18.99
Zm00001d037643_P001	Maize	cytosol	43.22	18.98
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	12.81	17.53
Bra008515.1-P	Field mustard	mitochondrion, plastid	61.81	16.97
Zm00001d005770_P001	Maize	cytosol	31.91	16.78
CDY13283	Canola	mitochondrion	14.32	16.15
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.8	14.05
Zm00001d023573_P002	Maize	plastid	11.56	12.71
KRH77470	Soybean	cytosol	3.52	10.22
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	22.86	9.59
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	22.61	7.77
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	4.52	6.5
CDY46254	Canola	cytosol	1.51	6.19
PGSC0003DMT400000378	Potato	cytosol	3.27	4.96
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	1.76	4.55

Protein Annotations

EnsemblPlants:Zm00001d050470_P001	EnsemblPlants:Zm00001d050470_T001	EnsemblPlantsGene:Zm00001d050470	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	PANTHER:PTHR18896
PANTHER:PTHR18896:SF61	PFAM:PF00614	PFscan:PS50035	ProteinID:AQK52570.1	SEG:seg	SUPFAM:SSF56024
UniParc:UPI00084512CF	UniProt:A0A1D6Q1S8	MapMan:50.3.1	:	:	:

Description

Phospholipase D beta 1

Coordinates

chr4:-:91088125..91091939

Molecular Weight (calculated)

45995.2 Da

IEP (calculated)

9.356

GRAVY (calculated)

-0.470

Length

398 amino acids

Sequence
(BLAST)

001: MVGRRRVALD LCGVRHTSIS KLATGLSGFI AQKRRTVCVL KLSEVRLGNG DGYQHGQCWR DVYDAICQAR RLIYIIGWSM FHTIHLVRDG HDDMALGDLL
101: RRKSQEGVQV LLLVWDDPTS RRLLGIKMEG YMGTRDEETR RFFKHSSVQI LLCPRSAGKR HSWVKQQETG TILTHHQKTV ILDADAGNHR RKIVAFMGGL
201: DLCGGRYDTP KHTLFRTLQT FHKEDYYNPN FAVEDARGPR EPWHDLHSKI DGPEAYDVLK NFEERWLKAS KRSAAKKLSK LSRSHNDSLL WINKIPDIIA
301: IDDEIYSNDD DPERWDVQNL VCGKNVLIDM SVHTAYVNAI RGAQHFIYIE NQYFLGSSFN WDSHRDVGEH KNLLLPYDHL KFPKFRTVKY STLQVLII

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.