CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	61.17	58.17
PGSC0003DMT400000378	Potato	cytosol	48.11	53.44
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	39.86	41.88
KRH77470	Soybean	cytosol	16.15	34.31
Zm00001d015256_P001	Maize	cytosol	46.74	32.85
KRH65182	Soybean	cytosol	69.76	26.75
GSMUA_Achr8P12030_001	Banana	plastid	68.04	24.63
TraesCS1D01G189300.1	Wheat	cytosol	67.7	24.32
TraesCS1B01G195200.1	Wheat	cytosol	67.7	24.32
KXG40331	Sorghum	cytosol	68.73	24.21
KRH48290	Soybean	nucleus	86.25	23.97
Zm00001d027386_P002	Maize	cytosol	68.38	23.86
Os03t0119100-01	Rice	plasma membrane	68.38	23.83
Solyc01g091910.2.1	Tomato	plastid	73.2	23.8
KRH77467	Soybean	nucleus	68.73	23.45
HORVU1Hr1G079150.1	Barley	cytosol	66.67	23.43
TraesCS1B01G382600.1	Wheat	mitochondrion	66.67	23.43
TraesCS1D01G370600.1	Wheat	cytosol	66.67	23.43
TraesCS5A01G520900.1	Wheat	cytosol	66.32	23.23
TraesCS4D01G346700.1	Wheat	cytosol	66.32	23.23
TraesCS1A01G365100.2	Wheat	mitochondrion	65.64	23.07
HORVU4Hr1G085550.2	Barley	cytosol	65.64	22.98
TraesCS4B01G352300.1	Wheat	cytosol	65.64	22.29
AT4G00240.1	Thale cress	cytosol	69.76	21.9
CDX90066	Canola	cytosol	73.2	21.87
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	66.32	21.81
CDY52961	Canola	cytosol, nucleus, peroxisome	70.79	20.77
KRH70487	Soybean	cytosol	78.35	20.61
KRH01625	Soybean	cytosol	77.66	20.6
CDY54926	Canola	cytosol, nucleus, peroxisome	70.79	20.54
GSMUA_Achr5P20150_001	Banana	cytosol	69.07	20.16
CDY15144	Canola	peroxisome	73.2	20.02
Bra033225.1-P	Field mustard	cytosol	73.2	19.91
VIT_15s0048g01160.t01	Wine grape	cytosol	73.54	19.69
KRH76589	Soybean	extracellular	57.39	19.33
EER92041	Sorghum	cytosol, nucleus, peroxisome	69.76	19.28
KRG93706	Soybean	nucleus	19.24	19.24
AT2G42010.2	Thale cress	peroxisome	73.2	19.22
KRH28860	Soybean	mitochondrion	57.04	19.17
Zm00001d029684_P001	Maize	peroxisome	68.73	19.08
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	46.39	18.99
KRH60977	Soybean	cytosol	54.98	18.89
KRH51648	Soybean	cytosol	54.64	18.77
Os10t0524400-01	Rice	plasma membrane	67.35	18.74
Solyc10g017650.1.1	Tomato	cytosol	71.82	18.68
KRH59149	Soybean	cytosol	53.61	18.2
KRH43039	Soybean	cytosol	53.61	18.2
TraesCS1A01G187400.1	Wheat	peroxisome	68.38	17.98
KRH44445	Soybean	cytosol	48.45	17.89
KRH47460	Soybean	cytosol	49.48	17.8
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	67.7	17.76
KRH23570	Soybean	endoplasmic reticulum	48.45	17.47
KRH10002	Soybean	cytosol	45.02	17.26
KRH52444	Soybean	cytosol, plastid	48.45	17.17
KRH52443	Soybean	cytosol	48.11	16.95
KRH44164	Soybean	cytosol	45.02	16.88
KRH47139	Soybean	cytosol	44.33	16.77
KRH09735	Soybean	cytosol	24.05	15.09
Bra008515.1-P	Field mustard	mitochondrion, plastid	71.13	14.28
Zm00001d050470_P001	Maize	mitochondrion	17.53	12.81
KRH61774	Soybean	cytosol	14.43	12.03
KRG92923	Soybean	cytosol, nucleus, peroxisome	25.77	6.7
KRH12101	Soybean	plastid	24.74	6.41
KRH37058	Soybean	plastid	24.74	6.39
KRH37270	Soybean	cytosol	2.75	3.04
KRH05308	Soybean	endoplasmic reticulum	1.37	2.03
KRH23329	Soybean	cytosol	1.37	1.51
KRH16190	Soybean	cytosol	0.0	0.0
KRH77469	Soybean	nucleus	0.0	0.0
KRH76243	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	UniProt:A0A0R0EHG4	EMBL:ACUP02012281
EnsemblPlantsGene:GLYMA_20G049900	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001736	EnsemblPlants:KRG89825	ProteinID:KRG89825
ProteinID:KRG89825.1	PFAM:PF12357	PFAM:PF13091	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
PFscan:PS50035	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SUPFAM:SSF56024	UniParc:UPI0006ED8B80

Description

hypothetical protein

Coordinates

chr20:+:10145947..10150380

Molecular Weight (calculated)

33647.6 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.273

Length

291 amino acids

Sequence
(BLAST)

001: MNVWEFTSDE SSGLDSNIHG SYLGMIEKIF RSIDSNSVKG FPKEPKDASS MNLVCGKNVL IDMSIHTAYV KAIRAAQHYI YIENQYFIGS SYNWSQHKDL
101: GANNLIPMEI ALKIAAKIRA NERLAVYIVI PMWRQRHKTM QMMYETIYKA LVEVGLEAAF SPQDYLIFFC LGNREAIDMY ENITARTNRR FMVYVRSKGM
201: IVDDEYVILG SANINQRSME GTRDIEIAMG AYQPHHTWQE GSIILIHGYR MSLWAEHTSL ECIRRVRTMG ELNWNQFASN DVTEMTRHQL K

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.