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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11850.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT4G11850.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT4G11850.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G346700.1 Wheat cytosol 97.83 97.83
HORVU4Hr1G085550.2 Barley cytosol 94.95 94.95
TraesCS4B01G352300.1 Wheat cytosol 97.83 94.87
KXG40331 Sorghum cytosol 78.46 78.93
Zm00001d027386_P002 Maize cytosol 77.86 77.58
Os03t0119100-01 Rice plasma membrane 77.74 77.37
Zm00001d050470_P001 Maize mitochondrion 34.66 72.36
PGSC0003DMT400000378 Potato cytosol 22.5 71.37
PGSC0003DMT400026602 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 25.87 70.26
TraesCS1A01G365100.2 Wheat mitochondrion 69.43 69.69
CDY41006 Canola mitochondrion 13.0 69.23
Bra022740.1-P Field mustard cytosol, extracellular 10.11 66.67
CDY28756 Canola cytosol, extracellular 10.11 66.67
GSMUA_Achr8P12030_001 Banana plastid 64.38 66.54
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 23.23 66.32
CDY13283 Canola mitochondrion 27.92 65.72
Bra000752.1-P Field mustard cytosol, nucleus, peroxisome 39.71 62.74
CDX86742 Canola cytosol 62.94 61.75
Bra014871.1-P Field mustard cytosol 62.82 61.63
VIT_02s0025g04620.t01 Wine grape cytosol 62.94 61.53
Solyc08g080130.2.1 Tomato nucleus 62.58 61.47
PGSC0003DMT400058531 Potato plastid 62.45 61.13
AT4G11850.1 Thale cress cytosol 62.45 60.49
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 20.1 60.29
CDY64184 Canola mitochondrion 58.97 60.12
Solyc01g091910.2.1 Tomato plastid 64.62 60.0
KRH77467 Soybean nucleus 61.49 59.91
CDX90807 Canola cytosol 58.12 59.85
AT4G11830.2 Thale cress cytosol 61.13 59.35
AT4G11840.1 Thale cress cytosol 61.61 59.12
Bra000753.1-P Field mustard cytosol 55.48 58.06
CDX90808 Canola cytosol 55.11 57.68
CDY13284 Canola cytosol 31.53 57.08
AT4G00240.1 Thale cress cytosol 62.82 56.31
KRG93706 Soybean nucleus 19.61 56.01
TraesCS1A01G187400.1 Wheat peroxisome 73.77 55.37
GSMUA_Achr5P20150_001 Banana cytosol 65.94 54.96
CDX90066 Canola cytosol 64.38 54.93
CDY52961 Canola cytosol, nucleus, peroxisome 63.66 53.33
KRH77470 Soybean cytosol 8.78 53.28
KRH65182 Soybean cytosol 48.62 53.23
CDY54926 Canola cytosol, nucleus, peroxisome 63.54 52.64
TraesCS5A01G202000.1 Wheat cytosol 51.99 51.49
TraesCS5A01G337100.2 Wheat cytosol 52.83 50.93
CDY15144 Canola peroxisome 64.62 50.47
KRH48290 Soybean nucleus 63.3 50.24
Bra033225.1-P Field mustard cytosol 64.62 50.19
CDY46254 Canola cytosol 5.66 48.45
VIT_15s0048g01160.t01 Wine grape cytosol 62.94 48.11
AT2G42010.2 Thale cress peroxisome 64.14 48.1
KRH01625 Soybean cytosol 63.42 48.04
KRH70487 Soybean cytosol 63.3 47.56
KRH77469 Soybean nucleus 3.97 47.14
Solyc10g017650.1.1 Tomato cytosol 63.06 46.83
TraesCS4A01G347800.3 Wheat cytosol, nucleus, peroxisome 36.1 46.37
TraesCS7A01G376500.3 Wheat cytosol 45.49 46.1
TraesCS4A01G338500.1 Wheat cytosol 6.98 45.31
TraesCS3A01G130000.1 Wheat plastid 42.84 43.84
TraesCS1A01G115300.1 Wheat cytosol 42.72 43.56
TraesCS6A01G071700.1 Wheat cytosol, nucleus, plastid 43.68 41.77
TraesCS1A01G373100.2 Wheat plastid 40.79 40.7
TraesCS7A01G545000.1 Wheat cytosol 40.19 40.44
TraesCS7A01G544900.1 Wheat cytosol 37.42 40.18
TraesCS5A01G223500.1 Wheat cytosol 38.99 39.23
Bra008515.1-P Field mustard mitochondrion, plastid 63.66 36.48
TraesCS1A01G228300.1 Wheat cytosol, nucleus, peroxisome 22.26 16.62
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2InterPro:C2_dom
InterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509
GO:GO:0005575GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016787GO:GO:0046470InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892PFAM:PF00168
PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_fam
InterPro:PLipase_D_plnPFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF61SMART:SM00155
SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024EnsemblPlantsGene:TraesCS5A01G520900EnsemblPlants:TraesCS5A01G520900.1TIGR:cd04015
Description
No Description!
Coordinates
chr5A:+:681463034..681466614
Molecular Weight (calculated)
93001.2 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.374
Length
831 amino acids
Sequence
(BLAST)
001: MSDDEDCRTT AALLASTSSN HRAVLLHGSL DIWIDEACNL PNKDILSNTM GGLLKSCTSD PGAKSTSDPY VTVLVGSATV ARTHVIQDDE NPKWRQHFLV
101: PVAHEAAAVS FVVKDSDVIG AELIGAVAVP AESLLAGDRV DGVYPVLEPS GKPCAPGATL RMSVQYVPVA RLTMYSHGVT PGPDFPGVPN TYFPLRRGGR
201: VTLYQDAHVP GDGQCLPEIR LGNGELYRHG QCWHDVYDAM SEAKHLIYIT GWSVFHTIHL VRDGDKARPL GDLLKKKSQE GVRVLLLVWD DPTSRSVLGI
301: QMEGYMGTRD EETRRFFKHS SVQILLCSRS AGKRHSWVKQ KETGTIFTHH QKTVIVDADA GNGKRKIVAF VGGLDLCGGR YDTPRHNLFH TLHTVHKEDY
401: YNPNFAVTDE RGPREPWHDL HSKIDGPAAF DVLKNFEERW SKSSKRHGSK KLSKSCNDTL LWIEKISEMA AIDDDVYSND NDTERWDVQI FRSIDSNSVK
501: AFPKDPREAT IQNLVCGKNV LIDMSIHTAY VTAIRAAQHF IYIENQYFLG SSFQWDSHRD LGANNLIPIE VALKIANKIY ANERFSAYII IPMWPEGNPT
601: GAPTQRILYW QKKTMQMMYE IIYKALKDTG LNGSYDPQDY LNFFCLGNRE AVENANAFAD AFSPTNPQDQ ARKNRRFMVY VHSKGMIVDD EYVIIGSANI
701: NQRSMEGTRD TEIAMGAYQP HYTWSNMFSA PRGQIYGYRM SLWAEHIGGV EASFERPDTL ECVRRVRGIG DANWKRFVAE EVTEMRGHLI RYPVAVEWNG
801: KVGPLQGCAA FPDVGGNICG SFSGIQENLT I
Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.