Factsheet for Bra000753.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90808	Canola	cytosol	98.87	98.87
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	54.16	81.75
Bra022740.1-P	Field mustard	cytosol, extracellular	11.84	74.6
Bra014871.1-P	Field mustard	cytosol	77.71	72.85
TraesCS1D01G189300.1	Wheat	cytosol	60.33	59.14
TraesCS1B01G195200.1	Wheat	cytosol	60.33	59.14
KRH77470	Soybean	cytosol	10.2	59.12
VIT_02s0025g04620.t01	Wine grape	cytosol	62.85	58.71
KRH77469	Soybean	nucleus	5.16	58.57
Solyc08g080130.2.1	Tomato	nucleus	62.34	58.51
PGSC0003DMT400058531	Potato	plastid	62.09	58.07
KRH77467	Soybean	nucleus	62.22	57.91
TraesCS1A01G365100.2	Wheat	mitochondrion	58.94	56.52
GSMUA_Achr8P12030_001	Banana	plastid	57.18	56.47
TraesCS1B01G382600.1	Wheat	mitochondrion	58.82	56.4
KRG93706	Soybean	nucleus	20.65	56.36
KXG40331	Sorghum	cytosol	58.44	56.17
TraesCS4D01G346700.1	Wheat	cytosol	58.69	56.08
TraesCS1D01G370600.1	Wheat	cytosol	58.44	56.04
HORVU4Hr1G085550.2	Barley	cytosol	58.56	55.96
Os03t0119100-01	Rice	plasma membrane	58.56	55.69
HORVU1Hr1G079150.1	Barley	cytosol	57.93	55.56
TraesCS5A01G520900.1	Wheat	cytosol	58.06	55.48
Zm00001d027386_P002	Maize	cytosol	58.19	55.4
Zm00001d050470_P001	Maize	mitochondrion	27.08	54.02
TraesCS4B01G352300.1	Wheat	cytosol	58.06	53.79
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	18.77	53.79
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	58.94	52.88
Zm00001d015256_P001	Maize	cytosol	25.69	49.28
Bra033225.1-P	Field mustard	cytosol	64.48	47.85
GSMUA_Achr5P20150_001	Banana	cytosol	59.95	47.74
Bra010512.1-P	Field mustard	cytosol	47.23	46.47
Bra034939.1-P	Field mustard	cytosol	48.74	46.46
Zm00001d029684_P001	Maize	peroxisome	60.83	46.09
EER92041	Sorghum	cytosol, nucleus, peroxisome	60.58	45.68
Bra017730.1-P	Field mustard	cytosol	47.98	45.41
Os10t0524400-01	Rice	plasma membrane	59.32	45.03
TraesCS1A01G187400.1	Wheat	peroxisome	60.83	43.63
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	60.45	43.28
Bra030375.1-P	Field mustard	cytosol	42.44	41.5
Bra027209.1-P	Field mustard	cytosol	42.19	41.36
Bra040960.1-P	Field mustard	cytosol	42.07	41.13
Bra021132.1-P	Field mustard	cytosol	41.56	40.64
Bra020497.1-P	Field mustard	cytosol	39.42	38.08
Bra037982.1-P	Field mustard	cytosol	34.01	35.48
Bra008515.1-P	Field mustard	mitochondrion, plastid	62.85	34.41
Bra009836.1-P	Field mustard	cytosol	39.67	33.8
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	22.29	16.51
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	21.41	16.24

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	EnsemblPlantsGene:Bra000753
EnsemblPlants:Bra000753.1	EnsemblPlants:Bra000753.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M4C975
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI000253FC8C	:	:	:	:	:

Description

AT4G11850 (E=3e-295) PLDGAMMA1, MEE54 | PLDGAMMA1; phospholipase D

Coordinates

chrA03:-:12891102..12894510

Molecular Weight (calculated)

89801.7 Da

IEP (calculated)

8.710

GRAVY (calculated)

-0.445

Length

794 amino acids

Sequence
(BLAST)

001: MSMEGSSTGS VRGELLHGNL DICVKEAKNL PNMDRLGKFT RNNNTSDPFV TVFIAGAKIG TTFVINNNEN PVWMQHFYVP VAHHAEVVKF VLEDSDQLGA
101: KFIGDVGIPT EELCSGNRIE GLFPILNSSG KPCKKGAVLS LSIQYSPVEM MKVYQMGVGN ECEGVPDLAG GMKYIHGKCW EDMDYAIRKA KNLIYITGWS
201: VYHPVRLVRR NNDPTDGTLG DLLKKRSKEG VRVLLLVWDD PTSRSFPKYR KQGVMNTSDE ETRHFFKNSS VQVIICPRSD AEGLHGLVKK SEVETYYTHH
301: QKTVIVDADA GQGRRKIVGF VGGLDVCNGR FDTPNHPLFT TLKTLHKDDV HNPNFVPNAE DGPRQPWHDL HSKIDGPGAY DLLTNFEQRW EKAVKKQHKI
401: WKHRSCSDDA LLKINMIPEI MGLSEASSTN DSDPESWHVQ VFRSIDSTSV KGFPKDPKEG TGRNLRCGKN ILVDMSIHTA YVKAIRSAQH FIYIENQYFF
501: GSSFNWCSHK DLGANNLIPM EIALKIASKI RAREKFAAYI VIPMWPEGDP TGMFMQGILY WQYKTMQMMY QTIYKALVEA ELDGQYEPQD YLNFFCLGTR
601: EASDETVSKY SSRNQPKKIA KPNAAQVQAL KSRRFMIYVH SKGMVVDDEF VLIGSANINK RSLEGTRDTE IAMGGYQLHH SWAKKGSRPR GQIYGYRMSL
701: WAEHLGFLEQ GFEEPENMEC VRRVRHLSKL NWRQYAAEEV TVMTSHLLKY PVQVDRTGKV SSLPGCKTFP DVGGKIIGHV LWAGTKPRHL EVTL

Best Arabidopsis Sequence Match ( AT4G11850.1 )
(BLAST)

001: MAYHPAYTET MSMGGGSSHG GGQQYVPFAT SSGSLRVELL HGNLDIWVKE AKHLPNMDGF HNRLGGMLSG LGRKKVEGEK SSKITSDPYV TVSISGAVIG
101: RTFVISNSEN PVWMQHFDVP VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG LSIQYTPMER MRLYQMGVGS
201: GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG
301: VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF
401: DTPKHPLFRT LKTLHKDDFH NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL RIDRIPDIVG LSEASSANDN
501: DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA
601: REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK
701: SRRFMIYVHS KGMVVDDEFV LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG FEEPENMECV RRVRQLSELN
801: WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD LGGKIIGSFL ALQENLTI

Arabidopsis Description

PLDGAMMA1Phospholipase D gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T053]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.