Factsheet for Bra017730.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47037	Canola	cytosol	99.88	94.69
AT4G35790.1	Thale cress	cytosol	84.86	82.03
Bra010512.1-P	Field mustard	cytosol	74.61	77.57
PGSC0003DMT400009253	Potato	cytosol	21.33	68.58
KRH28860	Soybean	mitochondrion	70.56	68.36
KRH76589	Soybean	extracellular	70.2	68.17
VIT_00s0264g00100.t01	Wine grape	cytosol	70.44	67.7
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	12.28	66.88
Solyc02g083340.2.1	Tomato	nucleus	67.58	65.47
Solyc02g061850.2.1	Tomato	cytosol	66.27	65.41
GSMUA_Achr1P07360_001	Banana	cytosol	55.42	63.52
GSMUA_AchrUn_...	Banana	cytosol	64.0	62.59
PGSC0003DMT400009250	Potato	cytosol	41.24	62.57
Bra034939.1-P	Field mustard	cytosol	62.1	62.55
Os09t0543100-02	Rice	plasma membrane	63.41	62.3
KXG36094	Sorghum	cytosol	63.41	61.93
TraesCS5A01G337100.2	Wheat	cytosol	62.81	61.14
TraesCS5B01G336100.1	Wheat	cytosol	62.81	61.14
GSMUA_Achr9P21120_001	Banana	nucleus	18.36	61.11
GSMUA_Achr1P14920_001	Banana	plastid	57.81	61.08
Zm00001d006257_P009	Maize	cytosol	62.1	60.86
TraesCS5D01G341800.2	Wheat	cytosol	59.83	60.63
HORVU5Hr1G084740.4	Barley	plastid	49.82	58.46
GSMUA_Achr11P...	Banana	cytosol	56.85	57.33
Zm00001d022594_P002	Maize	cytosol	60.07	56.95
Bra022740.1-P	Field mustard	cytosol, extracellular	8.22	54.76
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	32.54	51.9
Bra014871.1-P	Field mustard	cytosol	50.42	49.94
Bra000753.1-P	Field mustard	cytosol	45.41	47.98
TraesCS6B01G096200.1	Wheat	cytosol	48.03	46.59
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	48.15	46.49
OQU84227	Sorghum	cytosol	50.89	46.46
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	46.96	45.34
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	50.3	45.33
Bra027209.1-P	Field mustard	cytosol	43.62	45.19
Bra021132.1-P	Field mustard	cytosol	42.55	43.97
Bra040960.1-P	Field mustard	cytosol	42.31	43.72
Bra030375.1-P	Field mustard	cytosol	41.95	43.35
Bra020497.1-P	Field mustard	cytosol	41.72	42.58
Bra033225.1-P	Field mustard	cytosol	51.13	40.09
Bra009836.1-P	Field mustard	cytosol	41.24	37.12
Bra037982.1-P	Field mustard	cytosol	33.49	36.93
Bra008515.1-P	Field mustard	mitochondrion, plastid	50.66	29.31
Os02t0120200-01	Rice	extracellular	25.03	23.08
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	22.77	18.24
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	23.24	18.19

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	EnsemblPlantsGene:Bra017730	EnsemblPlants:Bra017730.1
EnsemblPlants:Bra017730.1-P	InterPro:C2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005886	GO:GO:0006629	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0008219	GO:GO:0009056	GO:GO:0009409	GO:GO:0009506	GO:GO:0009628
GO:GO:0009719	GO:GO:0009789	GO:GO:0009987	GO:GO:0012501	GO:GO:0016020	GO:GO:0016042
GO:GO:0016787	GO:GO:0046470	GO:GO:0046473	GO:GO:0070290	GO:GO:0090333	InterPro:IPR000008
InterPro:IPR001736	UniProt:M4DMJ5	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0002540BC7	SEG:seg	:	:	:	:

Description

AT4G35790 (E=9e-273) ATPLDDELTA, PLDDELTA | ATPLDDELTA; phospholipase D

Coordinates

chrA03:-:30080817..30084389

Molecular Weight (calculated)

95163.3 Da

IEP (calculated)

6.819

GRAVY (calculated)

-0.489

Length

839 amino acids

Sequence
(BLAST)

001: MAEKPSDDVM LLHGDLDLTI VQARKLPNMD TFSNHLRLCL TVCTNPSTAD EEEDRRARDG LPPPPQPQPS NARSHRKVIT SDPYVTVVVP QATLARTRVL
101: KNSQDPKWDE HFTISIAHPM SHLEFQVKDD DVFGAQIIGT AKIPVKDIAS GSPVKGWFPI LGASGKPPKK ETALYIEMTF TPFDQIHTYR SGIAGDPDRK
201: GVKGTYFPVR KGSQVRLYQD AHVMDGMLPE IGLDGGKVYQ HGKCWEDICY AVSEAHHMIY VVGWSVFHKV KLVREPTRKL PRGGDLTLGE LLKYKSEEGV
301: RVLLLVWDDK TSHDKFGIRT PGVMGTHDEE TRKFFKHSSV ICVLSPRYAS NTQAAGNNRK VTAFLGGIDL CDGRYDTPEH RILHDLDTVF KDDFHNPTYP
401: VGTKAPRQPW HDLHCRLEGP AAYDVLMNFE QRWRKATRWK EFSLRLKGKT HWQDDALIRI GRISWILSPV FKYLKDGTNM VPEDDPIVYV SKEDDPENWH
501: VQVFRSIDSG SLKGFPKYED EAKLQNLESA KRLVVDKSIQ TAYIQTIRSA QHFIYIENQY FLGSSYAWPN YKDAGADNLI PMELALKIVS KIRAKERFAV
601: YVVIPLWPEG DPKSGPVQEI LYWQSQTMQM MYDVIARELK AVQSDAHPLD YLNFYCLGKR EPLPEDMADT NGSAESDSYR FRRFMIYVHA KGMIVDDEYV
701: LIGSANINQR SMAGTKDTEI AMGAYQPHHT WTNKGKHPRG QVYGYRMSLW AEHLGKTGDE FVEPGDLECV RNVNEIAEGN WKTFIDSNFS ELQGHLIKYP
801: LQVDVDGKVS SLPDYDSFPD VGGKIIGAHS MALPDTLTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.