Factsheet for VIT_15s0048g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000378	Potato	cytosol	20.06	83.21
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	22.54	80.07
VIT_02s0025g04620.t01	Wine grape	cytosol	58.97	75.41
Solyc01g091910.2.1	Tomato	plastid	60.63	73.63
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	19.69	73.54
AT4G00240.1	Thale cress	cytosol	62.47	73.25
CDX90066	Canola	cytosol	65.41	73.0
TraesCS1B01G195200.1	Wheat	cytosol	53.45	71.73
TraesCS1D01G189300.1	Wheat	cytosol	53.36	71.6
GSMUA_Achr8P12030_001	Banana	plastid	52.07	70.4
KRH01625	Soybean	cytosol	71.02	70.37
CDY52961	Canola	cytosol, nucleus, peroxisome	64.03	70.16
KRH65182	Soybean	cytosol	48.94	70.09
CDY54926	Canola	cytosol, nucleus, peroxisome	64.58	69.99
KRH70487	Soybean	cytosol	71.11	69.89
KRH48290	Soybean	nucleus	66.97	69.53
CDY15144	Canola	peroxisome	67.8	69.27
Bra033225.1-P	Field mustard	cytosol	67.62	68.69
AT2G42010.2	Thale cress	peroxisome	69.18	67.87
TraesCS1D01G370600.1	Wheat	cytosol	50.97	66.91
TraesCS1B01G382600.1	Wheat	mitochondrion	50.97	66.91
TraesCS1A01G365100.2	Wheat	mitochondrion	50.78	66.67
Os03t0119100-01	Rice	plasma membrane	50.97	66.35
KXG40331	Sorghum	cytosol	50.14	65.98
HORVU1Hr1G079150.1	Barley	cytosol	50.23	65.94
Zm00001d027386_P002	Maize	cytosol	50.32	65.59
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.9	64.97
GSMUA_Achr5P20150_001	Banana	cytosol	59.06	64.39
HORVU4Hr1G085550.2	Barley	cytosol	49.03	64.14
TraesCS4D01G346700.1	Wheat	cytosol	48.48	63.42
TraesCS5A01G520900.1	Wheat	cytosol	48.11	62.94
Solyc10g017650.1.1	Tomato	cytosol	64.21	62.38
TraesCS4B01G352300.1	Wheat	cytosol	48.21	61.14
EER92041	Sorghum	cytosol, nucleus, peroxisome	58.97	60.87
Zm00001d029684_P001	Maize	peroxisome	58.42	60.59
Zm00001d050470_P001	Maize	mitochondrion	22.08	60.3
Os10t0524400-01	Rice	plasma membrane	57.87	60.13
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	15.0	58.84
TraesCS1A01G187400.1	Wheat	peroxisome	58.69	57.63
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	58.69	57.53
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	33.12	56.96
Zm00001d015256_P001	Maize	cytosol	20.42	53.62
VIT_00s0264g00100.t01	Wine grape	cytosol	41.77	52.0
VIT_18s0001g00770.t01	Wine grape	nucleus	41.67	51.77
Bra008515.1-P	Field mustard	mitochondrion, plastid	65.04	48.76
VIT_04s0008g05450.t01	Wine grape	cytosol	32.93	46.13
VIT_09s0002g06760.t01	Wine grape	cytosol	33.49	44.83
VIT_11s0016g05370.t01	Wine grape	cytosol	32.75	43.79
VIT_11s0016g05360.t01	Wine grape	cytosol	32.66	43.4
VIT_00s0264g00090.t01	Wine grape	cytosol	12.24	42.09
VIT_09s0002g02390.t01	Wine grape	cytosol	29.07	42.02
VIT_05s0077g01830.t01	Wine grape	cytosol	18.68	18.26

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100250490	wikigene:100250490	Gene3D:2.60.40.150	Gene3D:3.30.870.10
MapMan:5.7.2.4.2	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB61376	ProteinID:CCB61376.1	UniProt:F6I359
EMBL:FN596739	GO:GO:0003674	GO:GO:0003824	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
EntrezGene:LOC100250490	wikigene:LOC100250490	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI00015CB0EF	ArrayExpress:VIT_15s0048g01160
EnsemblPlantsGene:VIT_15s0048g01160	EnsemblPlants:VIT_15s0048g01160.t01	unigene:Vvi.12954	RefSeq:XP_002272857	RefSeq:XP_002272857.1	SEG:seg

Description

No Description!

Coordinates

chr15:-:15273832..15289373

Molecular Weight (calculated)

121304.0 Da

IEP (calculated)

7.139

GRAVY (calculated)

-0.465

Length

1087 amino acids

Sequence
(BLAST)

0001: MDDYGSSSSY PYNNSYGYPH HPPPSNHPYP PPNSDPYAPP PPPDFAYPYN SSNSFTYPQP MYPSVPSPSL PPSSAHHSGP LEYYHPPPPQ SAPIPYPYPY
0101: PVSPMPLSSP QPSLQQHSSF QYGSSHYHYQ QPESYPPSET YSHAPGRANS FSSHSSGSFG MGSSPNHEVV HDSSPLYPPI YPQLDDHLSN LHLSDNHASA
0201: PASPSAPSVR DSPPRYPSLS GSNSFSSGWE SYSGRQDSSL HSAYYHSSSF NGSQHSQNLQ IVPSKGSLKV LLLHGNLDIC VNEAKNLPNM DMFHKTLGDV
0301: FGKLPGNVSN KIEGHMPHKI TSDPYVSISV SGAVIGRTFV ISNSENPIWK QKFYVPVAHH AAEVHFMVKD SDVVGSQLIG VVAIPVVQIY SGAKVEGTFP
0401: ILNNGKQSKA GCVLSISIQY IPIEKLSIYH HGVGAGPDYL GVPGTYFPLR RGGTVTLYQD AHVPDGCLPS PMLAQGTPYV HGKCWHDIFD AICQAQRLIY
0501: ITGWSVWDKV RLVRDASSAA EYTLGELLKS KSQEGVRVLL LLWDDPTSRN ILGYKTDGIM QTHDEETRRF FKHSSVQVLL CPRFAGKRHS WIKQREVETI
0601: YTHHQKTVIL DADAGCNRRK IIAFVGGLDL CDGRYDTPHH PLFRSLEKEH KDDYHNPTFT GNVAGCPREP WHDMHCKIDG PAAYDVLTNF QERWLKAAKP
0701: HGIKKLKMSY DDALLKIERI PDILGISDAP CLGENDPEAW HVQVFRSIDS NSVKGFPKDS RDALQKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ
0801: YFIGSSFNWT SYKNLGADNI IPMEIALKIA NKIRANERFA AYIVVPMWPE GVPTGAATQR ILFWQHKTMQ MMYETIYKAL VEVGLEEAFT PQDYLNFFCL
0901: GNREAVDGSE TPGTTSPTAA NTPQAHSRKN RRFMIYVHSK GMIVDDEYVI LGSANINQRS MEGTRDTEIA MGAYQPHYTW ARKLSNPRGQ IYGYRMSLWA
1001: EHTGTIEDCF VEPESLECVK RVRSMGEMNW KQFASDDISE MRGHLLKYPV EVDRKGKVKP IPKCETFPDA GGNIVGSFLA IQENLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.