Factsheet for VIT_11s0016g05370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g05360.t01	Wine grape	cytosol	88.07	87.53
VIT_09s0002g06760.t01	Wine grape	cytosol	73.31	73.4
VIT_04s0008g05450.t01	Wine grape	cytosol	62.73	65.72
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	39.85	51.27
VIT_09s0002g02390.t01	Wine grape	cytosol	41.45	44.81
VIT_18s0001g00770.t01	Wine grape	nucleus	46.86	43.54
VIT_00s0264g00100.t01	Wine grape	cytosol	46.49	43.3
VIT_02s0025g04620.t01	Wine grape	cytosol	44.28	42.35
VIT_00s0264g00090.t01	Wine grape	cytosol	13.16	33.86
VIT_15s0048g01160.t01	Wine grape	cytosol	43.79	32.75
VIT_05s0077g01830.t01	Wine grape	cytosol	25.22	18.44

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100259366	wikigene:100259366	Gene3D:2.60.40.150	Gene3D:3.30.870.10
MapMan:5.7.2.4.1	EMBL:AM477316	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CAN81667	ProteinID:CAN81667.1
ProteinID:CCB51590	ProteinID:CCB51590.1	UniProt:F6HH94	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	EntrezGene:LOC100259366
wikigene:LOC100259366	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF85
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI00019844BF	ArrayExpress:VIT_11s0016g05370
EnsemblPlantsGene:VIT_11s0016g05370	EnsemblPlants:VIT_11s0016g05370.t01	RefSeq:XP_002282187	RefSeq:XP_002282187.2	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:F6HH94]

Coordinates

chr11:+:4701210..4707842

Molecular Weight (calculated)

92739.4 Da

IEP (calculated)

6.812

GRAVY (calculated)

-0.445

Length

813 amino acids

Sequence
(BLAST)

001: MEQILLHGTL HGTIYEVDRL SSGGPWNFID KLKRRIERAG SSKVYVTIDL DKARVGRTRK LENEETNPHW SECFHIYCAH KASHVVFSVK QENPIGATVI
101: GRAQLPVEEL LEGEVDRWLE LFHHDRTPIH GGSKLHVKLQ FFDVTRECNW SRGITSPKFP GVPYTFFPQR KGCRVLLYQD AHIPNKFIPK IPLSGGKYYE
201: PHRCWEDIFH AISNAKQLIY ITGWSVYTKI TLVRYSRGQK PGEHATLGEL FNKKTSTLGE LLKKKASEGV RVLMLVWDDR TSVKLLKKDG LMATHDEDTG
301: KYFHGSEVHC VLCPRDPDNG LSIVQDIEIS TMFTHHQKIV VVDSEMPNRG SERRRIVSFI GGIDLCDGRY DTPTHTIFRT LDTVNHDDFR QPNFPNASIT
401: KGGPRQPWHD VHCRLEGAIA WDVLFNFEQR WRKQGGKDLL VQLRELDDII IPPSPVMFPE DHETWNVQLF RSIDGGAAFG FPDSPEDAAR AGLICGSDHI
501: IDRSIQDAYI HAIRKAKNFI YIENQYFLGS SFCWNSDGLK VEDIGASHLI PKELSLKVVS KIETGERFSI YVVVPMWPEG IPESSSAQAI LNWQKRTMEM
601: MYNDIAQALH AKGLKANPKD YLTFFCLGNR ESKTIGEYEP PESPDHDTDY YRAQQSRRFM IYVHAKMMIV DDEYIVIGSA NINQRSMDGA RDSEIAMGGY
701: QPYHLATKQP ARGQIHGFRM ALWYEHLGLV DNSFLQPESL DCIQKVNKIA ERNWNLYSSE RTDDDLPGHL LSYPICVTDT GEVKEVPGSE FFPDTKAQVL
801: GSKSDYLPPI LTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.