Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0264g00100.t01 | Wine grape | cytosol | 65.19 | 23.6 |
| VIT_18s0001g00770.t01 | Wine grape | nucleus | 56.33 | 20.34 |
| VIT_02s0025g04620.t01 | Wine grape | cytosol | 41.77 | 15.53 |
| VIT_11s0016g05370.t01 | Wine grape | cytosol | 33.86 | 13.16 |
| VIT_04s0008g05450.t01 | Wine grape | cytosol | 31.01 | 12.63 |
| VIT_11s0016g05360.t01 | Wine grape | cytosol | 32.59 | 12.59 |
| VIT_09s0002g06760.t01 | Wine grape | cytosol | 32.28 | 12.56 |
| VIT_15s0048g01160.t01 | Wine grape | cytosol | 42.09 | 12.24 |
| VIT_12s0035g00200.t01 | Wine grape | cytosol, nucleus, peroxisome | 21.84 | 10.92 |
| VIT_09s0002g02390.t01 | Wine grape | cytosol | 24.68 | 10.37 |
| VIT_05s0077g01830.t01 | Wine grape | cytosol | 18.35 | 5.22 |
| CDY51545 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | MapMan:50.3.1 | InterPro:C2_dom | InterPro:C2_domain_sf |
| ProteinID:CCB49221 | ProteinID:CCB49221.1 | UniProt:F6HAH7 | EMBL:FN595505 | InterPro:IPR000008 | InterPro:IPR035892 |
| PFAM:PF00168 | InterPro:PLipase_D_fam | PFscan:PS50004 | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF86 | SMART:SM00239 |
| SUPFAM:SSF49562 | SUPFAM:SSF56024 | UniParc:UPI00015CDD88 | ArrayExpress:VIT_00s0264g00090 | EnsemblPlantsGene:VIT_00s0264g00090 | EnsemblPlants:VIT_00s0264g00090.t01 |
Description
No Description!
Coordinates
chrUn:+:19038824..19039774
Molecular Weight (calculated)
35772.3 Da
IEP (calculated)
8.162
GRAVY (calculated)
-0.365
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTPDSEQM VYLNGDLDLK ILEARHLPNM DLLALNLSRC FASCEARKRP SSPDRQRPGD RKDRHTNIIT SDPYVKVCVP QATLARTRVI SNTQNPYWNE
101: RFSIPLAHPL ANLKFEVKEN DLLGAELMGT VLIPAEKLAS GDPISGWFPV IGPLGKPPKP NTALRIEMQF TPCEKNPHYQ RGIAGHPEHM GVHQTYFPLR
201: RGGSVALYQD AHSPGEALSP EIELDGGIVY KRGQCWEDIC HAIVEAHHMI YLVGWSIFHK VKLIREHTRP LPRGGELSLG ELLKYKSEEG VRVLMLVWDD
301: RFSDKLHIFK VRLVKI
101: RFSIPLAHPL ANLKFEVKEN DLLGAELMGT VLIPAEKLAS GDPISGWFPV IGPLGKPPKP NTALRIEMQF TPCEKNPHYQ RGIAGHPEHM GVHQTYFPLR
201: RGGSVALYQD AHSPGEALSP EIELDGGIVY KRGQCWEDIC HAIVEAHHMI YLVGWSIFHK VKLIREHTRP LPRGGELSLG ELLKYKSEEG VRVLMLVWDD
301: RFSDKLHIFK VRLVKI
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.