Factsheet for VIT_18s0001g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025590	Potato	cytosol	72.23	77.93
Solyc04g082000.2.1	Tomato	cytosol	74.29	77.47
KRH60977	Soybean	cytosol	74.74	77.21
KRH51648	Soybean	cytosol	73.71	76.15
Bra034939.1-P	Field mustard	cytosol	69.37	72.87
GSMUA_Achr1P07360_001	Banana	cytosol	59.66	71.31
VIT_00s0264g00100.t01	Wine grape	cytosol	70.4	70.56
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	50.63	70.09
GSMUA_AchrUn_...	Banana	cytosol	68.0	69.35
Os09t0543100-02	Rice	plasma membrane	66.63	68.27
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	12.0	68.18
KXG36094	Sorghum	cytosol	66.4	67.64
GSMUA_Achr9P21120_001	Banana	nucleus	19.31	67.06
Zm00001d006257_P009	Maize	cytosol	65.37	66.82
TraesCS5A01G337100.2	Wheat	cytosol	65.49	66.47
TraesCS5B01G336100.1	Wheat	cytosol	65.14	66.13
GSMUA_Achr1P14920_001	Banana	plastid	59.89	66.0
TraesCS5D01G341800.2	Wheat	cytosol	62.4	65.94
HORVU5Hr1G084740.4	Barley	plastid	52.91	64.76
KRH37270	Soybean	cytosol	19.43	64.64
GSMUA_Achr11P...	Banana	cytosol	60.46	63.58
Zm00001d022594_P002	Maize	cytosol	64.23	63.5
CDX80734	Canola	cytosol	7.89	57.02
VIT_00s0264g00090.t01	Wine grape	cytosol	20.34	56.33
VIT_02s0025g04620.t01	Wine grape	cytosol	51.66	53.18
OQU84227	Sorghum	cytosol	52.69	50.16
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	52.57	49.41
TraesCS6B01G096200.1	Wheat	cytosol	48.46	49.02
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	48.57	48.91
VIT_04s0008g05450.t01	Wine grape	cytosol	42.86	48.32
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	47.54	47.87
VIT_11s0016g05370.t01	Wine grape	cytosol	43.54	46.86
VIT_11s0016g05360.t01	Wine grape	cytosol	43.2	46.21
VIT_09s0002g06760.t01	Wine grape	cytosol	42.63	45.94
VIT_15s0048g01160.t01	Wine grape	cytosol	51.77	41.67
VIT_09s0002g02390.t01	Wine grape	cytosol	35.43	41.22
Os02t0120200-01	Rice	extracellular	24.46	23.52
VIT_05s0077g01830.t01	Wine grape	cytosol	24.34	19.15

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100241982	wikigene:100241982	Gene3D:2.60.40.150	Gene3D:3.30.870.10
MapMan:5.7.2.4.3	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB45406	ProteinID:CCB45406.1	UniProt:F6H0D4
EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	EntrezGene:LOC100241982	wikigene:LOC100241982	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF112
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0002109523	ArrayExpress:VIT_18s0001g00770
EnsemblPlantsGene:VIT_18s0001g00770	EnsemblPlants:VIT_18s0001g00770.t01	RefSeq:XP_002284764	RefSeq:XP_002284764.1	SEG:seg	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:F6H0D4]

Coordinates

chr18:-:1536455..1544502

Molecular Weight (calculated)

99363.1 Da

IEP (calculated)

7.381

GRAVY (calculated)

-0.409

Length

875 amino acids

Sequence
(BLAST)

001: MSEKPKTRST EIAGFSCHSQ GYESASASSE FLTMADDSET IVYLHGDLDL NIIEARYLPN MDLMSERIRR CFTAFDSCRA PFSGGRKKGR HHKIITSDPY
101: VTVCLAGATV ARTRVISNSQ HPVWNEHLKI PLAHPVSCVE FQVKDNDVFG ADMIGTATVS AERIRTGDSI SDWFPILGFN GKPPKPDSAI YLKMRFISSE
201: INPLYTRGIT DPDHFGVKQS YFPVRLGGSV TLYQDAHVPN GMLPELELDD GVVYQHGKCW EDICHSILEA HHLVYIVGWS VYHKVKLVRE PTRPLPSGGN
301: LNLGELLKYK SQEGVRVLLL VWDDKTSHSR FLVNTVGVMQ THDEETRKFF KHSSVLCVLS PRYASSRSRW GFYFLSVVGT LFTHHQKCVI VDTQASGNNR
401: KITAFLGGLD LCDGRYDTPE HRLCHDLDTV FQNDYHNPTF SAVSKGPRQP WHDLHCKIEG PAAYDVLTNF EQRWRKATKW SEFGRRFKRI THWHEDALIK
501: LERISWILSP SPSVPYDDPS LWVSEENDPE NWHVQVFRSI DSGSLRGFPK DVPSAEAQNL VCAKNLVIDK SIQTAYIQAI RSAQHFIYIE NQYFIGSSYA
601: WPSYKNAGAD NLIPMELALK IASKIRAKER FSVYVVIPMW PEGNPSCASV QEILFWQGQT MQMMYDIIAQ ELQSMQLEDA HPQDYLNFYC LGNREEPPKE
701: VSSSNTQASD GVSTSKKFHR FMIYVHAKGM IVDDEYVILG SANINQRSMA GSRDTEIAMG AYQPRHTWAK KKKHPHGQIY GYRMSLWAEH LGMINNSFKE
801: PQTLDCVKNV NKMAEENWKR FTSDAYTPLQ GHLLKYPIQV DVDGKVRPLP GHETFPDFGG KVLGTRCNLP DALTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.