Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G524600.1 | Wheat | cytosol | 75.42 | 58.1 |
| TraesCS5B01G525600.1 | Wheat | cytosol | 74.03 | 56.49 |
| VIT_12s0035g00200.t01 | Wine grape | cytosol, nucleus, peroxisome | 52.55 | 53.8 |
| TraesCS5A01G202000.1 | Wheat | cytosol | 61.21 | 47.2 |
| GSMUA_Achr7P23470_001 | Banana | cytosol | 56.26 | 46.25 |
| KRH59149 | Soybean | cytosol | 55.95 | 42.24 |
| KRH43039 | Soybean | cytosol | 55.8 | 42.12 |
| Solyc10g024370.1.1 | Tomato | cytosol | 53.32 | 41.12 |
| PGSC0003DMT400011523 | Potato | cytosol | 54.25 | 41.0 |
| TraesCS4A01G338500.1 | Wheat | cytosol | 8.04 | 40.62 |
| TraesCS5A01G337100.2 | Wheat | cytosol | 53.94 | 40.49 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 47.3 | 36.96 |
| Solyc01g103910.1.1 | Tomato | cytosol | 38.95 | 36.15 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 46.37 | 36.1 |
| TraesCS6A01G071700.1 | Wheat | cytosol, nucleus, plastid | 45.44 | 33.83 |
| TraesCS7A01G376500.3 | Wheat | cytosol | 41.73 | 32.93 |
| TraesCS3A01G130000.1 | Wheat | plastid | 41.27 | 32.88 |
| TraesCS1A01G115300.1 | Wheat | cytosol | 40.49 | 32.15 |
| TraesCS1A01G373100.2 | Wheat | plastid | 38.49 | 29.89 |
| TraesCS7A01G545000.1 | Wheat | cytosol | 36.94 | 28.93 |
| TraesCS5A01G223500.1 | Wheat | cytosol | 36.79 | 28.81 |
| TraesCS7A01G544900.1 | Wheat | cytosol | 33.54 | 28.04 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 46.83 | 27.37 |
| TraesCS1A01G228300.1 | Wheat | cytosol, nucleus, peroxisome | 23.03 | 13.39 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G347800.3 | EnsemblPlantsGene:TraesCS4A01G347800 | Gene3D:3.30.870.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR001736 |
| InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam | KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF60 | PFAM:PF00614 | PFAM:PF12357 | PFscan:PS50035 | SEG:seg | SMART:SM00155 |
| SUPFAM:SSF56024 | MapMan:50.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:625531333..625534526
Molecular Weight (calculated)
73514.9 Da
IEP (calculated)
9.330
GRAVY (calculated)
-0.516
Length
647 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRMVGGRKH ATMYMCSVFY LVHSDESKVR TLQPDQHGRR CRRFIRRPDE PPMAASIGHL PSSRIRTPPT GDCTNLFIIQ FSKPLFSLFL GHRASMEKCA
101: SMSRLKVKNG LTETKSRLDA GRRDAHPRRA DQKVLQALGR PLRVGSSLRQ QQAQHLQAAR CGDSVYAPSE MRDCRFAGRK ITAFLGGLDL CDGRYDTPEH
201: RLFKDLDTVF HQDFHNPTFP VHSYGPRQPW HDLHCKIEGP AAYDILTNFQ QRWRKATKWR VNLKKVVIWH YDTLIKIKRM PWIVSPSTDE ADARVCHEQD
301: TENWHVQVFR SIDSGSVKGF PKLVQEAQSQ NLVCAKNLKI DRSIHSAYVK AIRSAQHFIY IENQYFIGSS FCWHSHQNTG ADNLIPVELA LKIASKIKAK
401: QRFAVYIVIP MWPEGIPTTA AVQQILFWQG QTMSMMYKII ADALESQGLL DSHPQDYLNF YCLGRRELAA SPEESLCNDN SALGMAQKHR RFMIYVHSKG
501: MVVDDEYVVI GSANINQRSM EGSRDTEIAM GAYQPHHTSA GDHGAPPRGQ VYGYRMSLWA EHLGGRAEEW FRRPESEECV RRVNAAAEEN WRAYVSPDET
601: TRGHLMRYPV KVDRDGGVGP LPGHECFPDV GGKVLGGQSS LPDALTT
101: SMSRLKVKNG LTETKSRLDA GRRDAHPRRA DQKVLQALGR PLRVGSSLRQ QQAQHLQAAR CGDSVYAPSE MRDCRFAGRK ITAFLGGLDL CDGRYDTPEH
201: RLFKDLDTVF HQDFHNPTFP VHSYGPRQPW HDLHCKIEGP AAYDILTNFQ QRWRKATKWR VNLKKVVIWH YDTLIKIKRM PWIVSPSTDE ADARVCHEQD
301: TENWHVQVFR SIDSGSVKGF PKLVQEAQSQ NLVCAKNLKI DRSIHSAYVK AIRSAQHFIY IENQYFIGSS FCWHSHQNTG ADNLIPVELA LKIASKIKAK
401: QRFAVYIVIP MWPEGIPTTA AVQQILFWQG QTMSMMYKII ADALESQGLL DSHPQDYLNF YCLGRRELAA SPEESLCNDN SALGMAQKHR RFMIYVHSKG
501: MVVDDEYVVI GSANINQRSM EGSRDTEIAM GAYQPHHTSA GDHGAPPRGQ VYGYRMSLWA EHLGGRAEEW FRRPESEECV RRVNAAAEEN WRAYVSPDET
601: TRGHLMRYPV KVDRDGGVGP LPGHECFPDV GGKVLGGQSS LPDALTT
001: MENYGWNYPY YPYRPPRPNP PYPAPPHHHG SMSHSGPLDH HHPPMSYYAS FDYQHQPPPP YPPVSYYASF SSHSDLSYSG RLDSSGHGFT STASPHSPGM
101: HIVPFGKASL KVLLLHGNLD IWVSCANNLP NLDLFHKTLG VVFGGMTNMI EGQLSKKITS DPYVSISVAG AVIGRTYVIS NSENPVWQQH FYVPVAHHAA
201: EVHFVVKDSD AVGSQLIGIV TIPVEQIYSG ARIEGTYSIR DSNGKPCKPG ATLSLSIQYT SMNKLSVYHS GVGAGPYYQG VPGTYFPLRE GGSVTLYQDA
301: HVPEGMLPGI KLGNGMCYEH GKCWHDMFHA ICQARRLIYI TGWSVWHNVR LVRDKEDPSS ECRLGELLRS KSQEGVRVLL LVWDDPTSQN ILGYMTDGVM
401: GTHDEETRRF FKDSSVQVLL CPRNAGKRHS WVKQREVGTI YTHHQKNLIV DADAGGNRRK IVAFVGGLDL CDGRYDTPQH PLFRTLQTDH NGDYHNPTFT
501: GNVSGCPREP WHDLHSKIDG PAAYDVLTNF EERWLKAAKP HRINKLKTSY DDALLRIDRI PDILRVLDAP TVSANDPEAW HVQIFRSIDS NSVKGFPKDP
601: KYATSKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ YFIGSSYDWN AHKDIGANNL IPMEIALKIA DKIRAKERFA AYIVIPMWPE GVPTGAATQR
701: ILYWQHKTMQ MMYGTIYNAL VEAGLEDEYS PQDYLNFFCL GNREMVNGNN ESGTGSASNE NTPQGLCRKS RRFMIYVHSK GMVVDDEYVV IGSANINQRS
801: MEGTRDTEIA MGAYQPQHTW ARRQSGPRGQ IYGYRMSLWA EHMALLDDCF VEPESLGCVR KVRTVAEENW EQFRSEEVSE MRGHLMKYPV EVDRKGKVRP
901: LPGSEEFPDV GGNVVGSFLA IQENLTI
101: HIVPFGKASL KVLLLHGNLD IWVSCANNLP NLDLFHKTLG VVFGGMTNMI EGQLSKKITS DPYVSISVAG AVIGRTYVIS NSENPVWQQH FYVPVAHHAA
201: EVHFVVKDSD AVGSQLIGIV TIPVEQIYSG ARIEGTYSIR DSNGKPCKPG ATLSLSIQYT SMNKLSVYHS GVGAGPYYQG VPGTYFPLRE GGSVTLYQDA
301: HVPEGMLPGI KLGNGMCYEH GKCWHDMFHA ICQARRLIYI TGWSVWHNVR LVRDKEDPSS ECRLGELLRS KSQEGVRVLL LVWDDPTSQN ILGYMTDGVM
401: GTHDEETRRF FKDSSVQVLL CPRNAGKRHS WVKQREVGTI YTHHQKNLIV DADAGGNRRK IVAFVGGLDL CDGRYDTPQH PLFRTLQTDH NGDYHNPTFT
501: GNVSGCPREP WHDLHSKIDG PAAYDVLTNF EERWLKAAKP HRINKLKTSY DDALLRIDRI PDILRVLDAP TVSANDPEAW HVQIFRSIDS NSVKGFPKDP
601: KYATSKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ YFIGSSYDWN AHKDIGANNL IPMEIALKIA DKIRAKERFA AYIVIPMWPE GVPTGAATQR
701: ILYWQHKTMQ MMYGTIYNAL VEAGLEDEYS PQDYLNFFCL GNREMVNGNN ESGTGSASNE NTPQGLCRKS RRFMIYVHSK GMVVDDEYVV IGSANINQRS
801: MEGTRDTEIA MGAYQPQHTW ARRQSGPRGQ IYGYRMSLWA EHMALLDDCF VEPESLGCVR KVRTVAEENW EQFRSEEVSE MRGHLMKYPV EVDRKGKVRP
901: LPGSEEFPDV GGNVVGSFLA IQENLTI
Arabidopsis Description
PLDBETA2Phospholipase D beta 2 [Source:UniProtKB/Swiss-Prot;Acc:O23078]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.