CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43039	Soybean	cytosol	96.15	96.15
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	56.83	77.06
GSMUA_Achr7P23470_001	Banana	cytosol	65.81	71.66
Os07t0260400-01	Rice	cytosol, plasma membrane	64.99	66.47
EER98315	Sorghum	cytosol	64.76	66.15
Solyc10g024370.1.1	Tomato	cytosol	64.18	65.55
Solyc01g103910.1.1	Tomato	cytosol	52.74	64.85
HORVU5Hr1G060030.2	Barley	cytosol	63.48	64.84
PGSC0003DMT400011523	Potato	cytosol	64.53	64.6
TraesCS5A01G202000.1	Wheat	cytosol	62.78	64.12
TraesCS5D01G208300.2	Wheat	cytosol	63.13	64.02
TraesCS5B01G200600.1	Wheat	cytosol	62.89	63.79
KRH60977	Soybean	cytosol	62.08	62.81
TraesCS5D01G524600.1	Wheat	cytosol	61.26	62.5
KRH51648	Soybean	cytosol	61.61	62.34
TraesCS5B01G525600.1	Wheat	cytosol	60.79	61.44
KRH37270	Soybean	cytosol	18.79	61.22
KRH76243	Soybean	cytosol	5.83	60.98
Zm00001d005484_P003	Maize	cytosol	61.73	60.87
KRH76589	Soybean	extracellular	61.03	60.53
KRH28860	Soybean	mitochondrion	60.33	59.7
TraesCS4A01G347800.3	Wheat	cytosol, nucleus, peroxisome	42.24	55.95
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	18.2	53.61
KRH77469	Soybean	nucleus	4.32	52.86
KRH77467	Soybean	nucleus	50.41	50.64
KRG93706	Soybean	nucleus	16.57	48.8
KRH23570	Soybean	endoplasmic reticulum	43.87	46.59
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	38.51	46.41
KRH47460	Soybean	cytosol	43.64	46.23
KRH44445	Soybean	cytosol	42.01	45.69
KRH65182	Soybean	cytosol	39.32	44.4
KRH52443	Soybean	cytosol	42.59	44.19
KRH52444	Soybean	cytosol, plastid	41.89	43.73
KRH48290	Soybean	nucleus	52.86	43.27
KRH77470	Soybean	cytosol	6.88	43.07
KRH01625	Soybean	cytosol	52.51	41.02
KRH61774	Soybean	cytosol	16.69	40.97
KRH70487	Soybean	cytosol	52.86	40.96
KRH09735	Soybean	cytosol	22.05	40.73
KRH10002	Soybean	cytosol	34.42	38.87
KRH47139	Soybean	cytosol	34.31	38.23
KRH44164	Soybean	cytosol	34.31	37.89
KRH23329	Soybean	cytosol	7.12	23.02
KRH16190	Soybean	cytosol	2.8	20.87
KRH12101	Soybean	plastid	23.57	17.99
KRH37058	Soybean	plastid	23.34	17.76
KRG92923	Soybean	cytosol, nucleus, peroxisome	22.29	17.05
KRH05308	Soybean	endoplasmic reticulum	3.85	16.75

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100779740	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3
EMBL:ACUP02003303	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_05G168300	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	UniProt:I1K497	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
ProteinID:KRH59147.1	ProteinID:KRH59148.1	EnsemblPlants:KRH59149	ProteinID:KRH59149	ProteinID:KRH59149.1	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF60	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000233A248
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:35880140..35891738

Molecular Weight (calculated)

96975.9 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.383

Length

857 amino acids

Sequence
(BLAST)

001: MDCHGGISQS SPNREYEGLN GPVFLHGDLD LLIIEAKSLP NLDLSSETIR KCITMGNMCH PPFIKGLKTH SGKDKMITSD PYVSVCIAGA TIAQTRVIAN
101: CENPLWDEQF IVPVAHPAQK LEFLVKDNDI LGAELIGVVE IPVQKIIAGN TVNDWFPIIG QYGNCLKPYP ELHISVQYRQ IGVNRSESIS SGDGKALGVP
201: KTYFPLRKGG SVTLYQDAHL PDGMLPEITL EGGKVFQHNK CWEDICHAIL EAHHLIYIIG WSVYHPVRLV REATKPLPSG GELSLGELLK YKSQEGLRVV
301: MLIWDDRTSH DKFLLKTDGV MQTHDEETKK FFKHSTVHCV LSPRYASNKL SIFKQQVVGT LFTHHQKCVL VDSLGSGNNR KITAFIGGLD LCDGRYDTPE
401: HRLFRDLDTV FHNDFHNPTF QLHSNSCAPR QPWHDLHCKI EGPAAYDILT NFEQRWRKAK KWRDFRLKKV TNWHDDALLR LDRISWIVKP SPSSNGDKSV
501: HVTDENDPES WNVQIFRSID SGSVKGFPKD VDKAKAQNLF CGKNLKVDQS IHTAYVRAIR SAEHFVYIEN QYFLGSSYHW PSYKNNAGAN HLVPMELALK
601: IAGKIGANER FCVYIVIPMW PEGVPTSAAV QEILFWQGQT MSMMYKIVAD ALEKAGLSYQ YHPQDYLNFY CLGKREPQST NISPTPNPSE NRALVSVKKF
701: RRFMIYVHAK GMVVDDEYVI IGSANINQRS LDGSRDTEIA MGAYQPKYTW TEKNAHPRGQ VYGYRMSLWA EHLGSLDHCF AEPHNLECVR HVNKIAKRNW
801: DIYVSEEENR MRGHLMQYPV KISRDGKVSA LDDYESFPDV GGKILGSPNS LPDALTT

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.