CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47139	Soybean	cytosol	95.75	96.62
KRH10002	Soybean	cytosol	79.12	80.9
KRH23329	Soybean	cytosol	25.13	73.58
VIT_09s0002g02390.t01	Wine grape	cytosol	69.33	71.54
PGSC0003DMT400006661	Potato	cytosol	51.29	69.22
Bra037982.1-P	Field mustard	cytosol	62.63	63.86
AT1G55180.1	Thale cress	cytosol	62.63	63.78
CDY24051	Canola	cytosol	62.24	63.72
CDY33065	Canola	cytosol	62.24	63.72
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	16.88	45.02
KRH23570	Soybean	endoplasmic reticulum	43.04	41.39
Os09t0421300-01	Rice	cytosol	43.56	41.37
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	37.76	41.21
Zm00001d005770_P001	Maize	cytosol	40.08	41.08
EER98913	Sorghum	cytosol	43.56	40.87
TraesCS5B01G222500.1	Wheat	cytosol	43.43	40.8
TraesCS5A01G223500.1	Wheat	cytosol	43.3	40.68
KRH47460	Soybean	cytosol	42.4	40.67
KRH44445	Soybean	cytosol	41.24	40.61
HORVU5Hr1G064520.1	Barley	cytosol	43.43	40.55
TraesCS5D01G231100.1	Wheat	cytosol	43.17	40.36
KRH52443	Soybean	cytosol	42.65	40.07
KRH52444	Soybean	cytosol, plastid	41.37	39.1
KRH77467	Soybean	nucleus	39.69	36.11
KRH61774	Soybean	cytosol	16.24	36.1
KRH09735	Soybean	cytosol	21.52	35.99
KRH60977	Soybean	cytosol	38.53	35.3
KRH77470	Soybean	cytosol	6.19	35.04
KRH76589	Soybean	extracellular	38.79	34.84
KRH51648	Soybean	cytosol	37.89	34.71
HORVU7Hr1G082870.1	Barley	cytosol	24.48	34.61
KRH28860	Soybean	mitochondrion	38.53	34.53
KRH43039	Soybean	cytosol	38.02	34.42
KRH59149	Soybean	cytosol	37.89	34.31
KRG93706	Soybean	nucleus	12.24	32.65
KRH77469	Soybean	nucleus	2.84	31.43
KRH37270	Soybean	cytosol	10.31	30.42
KRH65182	Soybean	cytosol	28.09	28.72
KRH48290	Soybean	nucleus	38.66	28.65
KRH01625	Soybean	cytosol	38.4	27.16
KRH70487	Soybean	cytosol	38.66	27.12
KRH76243	Soybean	cytosol	2.58	24.39
KRH16190	Soybean	cytosol	3.35	22.61
KRH12101	Soybean	plastid	24.1	16.65
KRH37058	Soybean	plastid	24.1	16.61
KRG92923	Soybean	cytosol, nucleus, peroxisome	21.78	15.09
KRH05308	Soybean	endoplasmic reticulum	3.61	14.21

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:100812642	Gene3D:2.60.40.150	MapMan:5.7.2.4.4	EMBL:ACUP02004908
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_08G194100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:K7L7M8	EnsemblPlants:KRH44164
ProteinID:KRH44164	ProteinID:KRH44164.1	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF79	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI000295A3E9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:15634431..15638211

Molecular Weight (calculated)

89344.6 Da

IEP (calculated)

6.684

GRAVY (calculated)

-0.420

Length

776 amino acids

Sequence
(BLAST)

001: MNILTVRAIE ETPKLLHGTI EATIFNATPY SPLFPFNRFS CFQCICANGN PAYVTIKIDS QKFAKTSQES NRVWNQTFQI QCAHPADSCI TITLKTSRSS
101: VLGKFHIQAQ QLLKKGGLIN GFFPLLMDNG KPNPKLKLKF QLWFKPAELE PSWAKMLSND WEFQGLREAT FPLRSNCHVK LYHDAHHSSA FQPPFDLCGA
201: PKKLWEDVYK AIEGAKYLVY IAGWSFNPMM VLVRDPHTEI PHARGIKLGE LLKKKAEEGV AVRVMLWDDE TSLPFVKNKG ELNNQDEEAF AYFNHTKVIC
301: RKCPRLHHMF PTLFAHHQKT ITVDTKAPKS VGDRELMSFL GGLDLCDGRY DTEQHSLFQT LIRESHCYDF YQTSIEGASL NKGGPREPWH DAHACVTGEA
401: AWDVLTNFEQ RWTKQCDPSF LVPSSTLANL MPRTSSSTLM ERNWKVQVYR SIDHVSVSEL STKLNVERSI HEAYVEAIRR AERFIYIENQ YFIGGCHWWK
501: KDRHSGCTNL IPIEIALKVV SKIKAKERFA VYIVIPMWPE GEPESEPVQD ILHWTRETMT MMYRLIGEAI QESGEPAHPR DYLNFFCLAN REQKGQGEYL
601: PLDSPQPETQ YWNAQKNRRF MVYVHSNFMI VDDLYILIGS ANVNQRSMDG KRDTEIAIGC YQSQDGDDDT NQVNLDDIQA YRMSLWYEHT VSVDELFLEP
701: QRLECVERMR SIGDEMWEIY SSEEIVDMEG VHLVTYPVRV TQEGYVKNLT DGVHFPDTNS LVKGKRSKIL PPIFTT

Best Arabidopsis Sequence Match ( AT1G55180.1 )
(BLAST)

001: MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT

Arabidopsis Description

PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.