CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63527	Canola	cytosol	90.96	93.41
CDY20148	Canola	cytosol, peroxisome, plastid	75.51	64.91
CDY60551	Canola	cytosol	99.13	41.87
Bra040960.1-P	Field mustard	cytosol	93.29	39.41
CDY47540	Canola	cytosol	93.29	39.41
AT1G52570.1	Thale cress	cytosol	91.25	38.64
CDX80734	Canola	cytosol	13.41	38.02
CDX97705	Canola	cytosol	81.92	34.69
CDY30108	Canola	cytosol	81.63	34.57
CDY21865	Canola	cytosol	80.17	33.87
KRH09735	Soybean	cytosol	45.77	33.84
VIT_09s0002g06760.t01	Wine grape	cytosol	74.93	31.65
PGSC0003DMT400073469	Potato	cytosol	72.3	30.66
Os01t0172400-03	Rice	plastid	71.72	30.3
KXG31749	Sorghum	cytosol	71.72	30.3
EES17463	Sorghum	cytosol	71.72	30.26
Zm00001d008727_P002	Maize	cytosol	71.14	30.05
TraesCS3A01G130000.1	Wheat	plastid	70.85	29.93
Zm00001d039670_P004	Maize	cytosol	70.85	29.93
Solyc06g068090.2.1	Tomato	plastid	70.55	29.91
PGSC0003DMT400001650	Potato	cytosol, plastid	70.55	29.84
TraesCS3D01G130900.1	Wheat	golgi	70.55	29.8
TraesCS3B01G149100.1	Wheat	unclear	70.55	29.8
HORVU3Hr1G024530.2	Barley	plastid	70.26	29.68
GSMUA_Achr10P...	Banana	cytosol, plastid	39.36	29.54
Solyc03g116620.2.1	Tomato	plastid	69.68	29.47
GSMUA_Achr7P10170_001	Banana	cytosol	45.77	29.07
CDY13284	Canola	cytosol	37.32	27.89
OQU77524	Sorghum	plastid	65.6	27.41
Os05t0171000-01	Rice	plasma membrane	64.14	26.7
TraesCS1D01G116700.1	Wheat	cytosol	62.68	26.38
TraesCS1A01G115300.1	Wheat	cytosol	62.39	26.26
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	54.23	26.16
TraesCS1B01G135200.1	Wheat	cytosol	60.64	25.43
HORVU1Hr1G025370.1	Barley	cytosol	62.39	25.03
Zm00001d037643_P001	Maize	cytosol	64.43	24.39
CDY05490	Canola	cytosol	54.81	23.07
CDY05351	Canola	cytosol	53.64	22.58
CDX80505	Canola	cytosol	48.4	21.28
CDX88175	Canola	cytosol	43.15	19.97
CDX72557	Canola	cytosol	39.94	15.84
CDY64184	Canola	mitochondrion	37.61	15.83
CDY47037	Canola	cytosol	39.94	15.48
CDY35793	Canola	cytosol	38.78	15.38
CDX86742	Canola	cytosol	37.61	15.23
CDX90807	Canola	cytosol	34.99	14.87
CDY67335	Canola	cytosol	37.03	14.67
CDY41630	Canola	cytosol	37.03	14.65
CDX90066	Canola	cytosol	40.23	14.17
CDY52961	Canola	cytosol, nucleus, peroxisome	40.23	13.91
CDX90808	Canola	cytosol	32.07	13.85
CDY54926	Canola	cytosol, nucleus, peroxisome	40.23	13.76
CDY33065	Canola	cytosol	29.15	13.19
CDY15144	Canola	peroxisome	40.23	12.97
CDY24051	Canola	cytosol	28.57	12.93
CDY51545	Canola	cytosol	3.5	8.39
CDY18811	Canola	cytosol, nucleus, peroxisome	21.28	6.97
CDY51604	Canola	cytosol	5.54	6.74
CDX92096	Canola	nucleus	19.53	6.19
CDX95904	Canola	cytosol, nucleus, peroxisome	19.53	6.16
CDY42882	Canola	nucleus	4.37	4.66
CDY46254	Canola	cytosol	0.29	1.03
CDY20149	Canola	cytosol, nucleus, peroxisome	0.58	0.94
CDY70643	Canola	cytosol, peroxisome	0.58	0.94
CDY13283	Canola	mitochondrion	0.29	0.28
CDY41006	Canola	mitochondrion	0.0	0.0
CDY28756	Canola	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDX87920	EnsemblPlantsGene:GSBRNA2T00147176001	Gene3D:2.60.40.150	Gene3D:3.30.870.10	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	MetaCyc:PWY-3561
MetaCyc:PWY-7039	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	PFAM:PF00168	ProteinID:CDX87920	ProteinID:CDX87920.1
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EDE871	MapMan:50.3.1	:

Description

BnaC06g09820D

Coordinates

chrLK031852:-:1506017..1507744

Molecular Weight (calculated)

38537.4 Da

IEP (calculated)

7.927

GRAVY (calculated)

-0.340

Length

343 amino acids

Sequence
(BLAST)

001: MEEFLLHGRL HATIYEIDAL HATQGGRSGF LGKMLANVEE KIGVGKGETQ LYATIDLEKA RVGRTRKITN EPKSPKWHES FHIYCGHMAK HVIFTVKDDN
101: PIGATLIGRG YVPVEDILHG EEVDRWVEIL DTEKKPIEGG SKIHVKLQYF GVEKDKNWNR GIKSAKFPGV PYTFFSQRKG CKVSLYQDAH IPGNFVPKIP
201: LAGGKHYEAG RCWEDIFDAI TNAKHLIYIT GWSVYTEISL VRDSRRPKEG GDVTIGEILK KKASEGVKVI LLVWDDRTSV DLLKQDGLMA THDEETANFF
301: RGTDVNCVLC PRNPDDGGSI VQNLQVSTMF THHQKIVVVC IKL

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.