CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92096	Canola	nucleus	98.53	99.08
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	96.14	97.57
AT3G16785.4	Thale cress	plastid	93.93	89.73
CDY51604	Canola	cytosol	22.89	88.3
VIT_05s0077g01830.t01	Wine grape	cytosol	75.83	74.19
Solyc01g065720.2.1	Tomato	cytosol	75.28	74.05
KRH12101	Soybean	plastid	75.46	73.11
KRH37058	Soybean	plastid	75.64	73.09
OQU77834	Sorghum	endoplasmic reticulum, golgi	44.03	69.52
GSMUA_Achr11P...	Banana	mitochondrion	10.85	67.05
TraesCS1D01G230100.1	Wheat	cytosol, nucleus, peroxisome	69.12	66.49
TraesCS1B01G242500.1	Wheat	cytosol, nucleus, peroxisome	69.03	66.4
KXG32384	Sorghum	cytosol, nucleus, peroxisome	68.29	66.28
TraesCS1A01G228300.1	Wheat	cytosol, nucleus, peroxisome	67.74	66.22
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	57.44	65.86
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	68.57	64.37
HORVU1Hr1G059050.25	Barley	plastid	66.82	62.51
CDY18811	Canola	cytosol, nucleus, peroxisome	59.38	61.7
OQU77836	Sorghum	cytosol	26.19	59.5
Os05t0358700-01	Rice	cytosol, plasma membrane	7.26	45.4
CDY70643	Canola	cytosol, peroxisome	5.42	27.7
CDY28756	Canola	cytosol, extracellular	3.03	26.19
CDX88175	Canola	cytosol	17.56	25.78
CDY05351	Canola	cytosol	19.3	25.77
CDY05490	Canola	cytosol	19.3	25.77
CDX80505	Canola	cytosol	18.29	25.51
CDY20149	Canola	cytosol, nucleus, peroxisome	4.96	25.35
CDY47540	Canola	cytosol	18.57	24.88
CDY30108	Canola	cytosol	18.29	24.57
CDX97705	Canola	cytosol	18.29	24.57
CDY21865	Canola	cytosol	18.29	24.51
CDY60551	Canola	cytosol	18.29	24.51
CDY24051	Canola	cytosol	16.82	24.14
CDY13283	Canola	mitochondrion	7.81	24.08
CDY33065	Canola	cytosol	16.73	24.01
CDX72557	Canola	cytosol	18.38	23.12
CDY35793	Canola	cytosol	18.29	23.01
CDY47037	Canola	cytosol	18.66	22.94
CDY67335	Canola	cytosol	18.2	22.86
CDY64184	Canola	mitochondrion	17.0	22.7
CDY41630	Canola	cytosol	18.01	22.61
CDY41006	Canola	mitochondrion	3.22	22.44
CDX90807	Canola	cytosol	16.64	22.43
CDX90808	Canola	cytosol	16.08	22.04
CDX86742	Canola	cytosol	16.82	21.61
CDY20148	Canola	cytosol, peroxisome, plastid	7.44	20.3
CDX87920	Canola	cytosol	6.16	19.53
CDX90066	Canola	cytosol	17.46	19.51
CDY52961	Canola	cytosol, nucleus, peroxisome	17.37	19.05
CDY54926	Canola	cytosol, nucleus, peroxisome	17.46	18.94
CDY63527	Canola	cytosol	5.79	18.86
CDY42882	Canola	nucleus	5.51	18.63
CDY51545	Canola	cytosol	2.39	18.18
CDY15144	Canola	peroxisome	17.74	18.14
CDY13284	Canola	cytosol	7.63	18.08
CDY46254	Canola	cytosol	1.47	16.49
CDX80734	Canola	cytosol	1.75	15.7

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.30.29.30	Gene3D:3.30.870.10	MapMan:5.7.2.4.5	GO:A0A078E5M6
EnsemblPlants:CDX95904	ProteinID:CDX95904	ProteinID:CDX95904.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0006629	GO:GO:0006654	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0048017	EnsemblPlantsGene:GSBRNA2T00101903001
InterPro:IPR001736	InterPro:IPR001849	InterPro:IPR011993	PFAM:PF00614	PFAM:PF13091	InterPro:PH-like_dom_sf
InterPro:PH_domain	PIRSF:PIRSF009376	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_euk	InterPro:PLipase_D_fam
PFscan:PS50003	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF111	MetaCyc:PWY-3561	MetaCyc:PWY-7039
SMART:SM00155	SMART:SM00233	SUPFAM:SSF50729	SUPFAM:SSF56024	UniParc:UPI0004EEED4E	SEG:seg

Description

BnaC05g36550D

Coordinates

chrLK031891:-:1307804..1315520

Molecular Weight (calculated)

123207.0 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.458

Length

1088 amino acids

Sequence
(BLAST)

0001: MASEQLMSPA GGGGGGGGGG RYFQMQPEQI PSMVSSLFSF APAPTQEANR IFEELPKAVI VSVSRPDASD ISPFKWQLVK KASQVFYLHF ALKKRAFIEE
0101: IHEKQEQVKE WLQNLGIGDH APIVQDEDVD EVQLHQEESA KNRDVPSSAA LPVIRPLGRQ QSISVRGKHA MQEYLNHFLG NLDIVNSREV CRFLEVSMLS
0201: FSPEYGPKLK EDYIMVKHLP KISKSDDSDR CCGCCWFCCC NDNWQKVWGV LKPGFLALLE DPFDPKLLDI IVFDVLPVSN GNDGADVSLA VELKDHNPLR
0301: HAFKVTSGNR SIRIRAKSSA KVKDWVASIN DAALRPPEGW CHPHRFGSFA PPRGLTDDGS QAQWFVDGGA AFAAMAEAIE NAKSEIFICG WWVCPELYLR
0401: RPYDSHTSSR LDNLLENKAK QGVQIYILIY KEVALALKIN SVYSKRRLLS IHENVRVLRY PDHFSSGVYL WSHHEKLVIV DHQVCFIGGL DLCFGRYDTF
0501: EHKVGDNPSV TWPGKDYYNP RESEPNTWED ALKDELDRKK YPRMPWHDVH CALWGPPCRD VARHFVQRWN YAKRNKAPYE DSIPLLMPQH HMVIPHYMGR
0601: QEESDTECKN DEDSIRGIRR DDSFSSGSSL QDIPLLLPQE PVDEDGSSRG HKANGTNSRN GPFSFRKSKI EPGVGDTPMR GFVDDRNGLH LPVAKRGSNS
0701: IDSEWWETQE RGYQVGSPDE TGQVGPRTSC RCQIIRSVSQ WSAGTSQVEE SIHSAYRSLI DKAEHFIYIE NQFFISGLSG DDTIKNRVLE ALYKRILRAH
0801: NEKKSFRVIV VIPLLPGFQG GIDDSGAASV RAIMHWQYRT MYRGHNSILN NLYKTVGPKA NDYISFYGLR AYDKLSEDGP VATSQVYVHS KIMIIDDRAA
0901: LIGSANINDR SLLGSRDSEI GVLIEDKELV DSFMAGKPWK AGKFSLSLRL SLWSEHLGLR SGEIDQIIDP VSDSTYKEIW MATAKTNTMI YQDVFSCVPN
1001: DLIHSRMAFR QSISYWKEKL GHTTIDLGIA PEKLESYHNG DIKRSDPMDR LKSIKGHLVS FPLDFMCKED LRPFFNESEY YASAQVFH

Best Arabidopsis Sequence Match ( AT3G16785.1 )
(BLAST)

0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH

Arabidopsis Description

PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.