Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95904 Canola cytosol, nucleus, peroxisome 99.08 98.53
Bra022178.1-P Field mustard cytosol, nucleus, peroxisome 97.04 97.95
AT3G16785.4 Thale cress plastid 94.64 89.9
CDY51604 Canola cytosol 23.01 88.3
VIT_05s0077g01830.t01 Wine grape cytosol 76.34 74.28
Solyc01g065720.2.1 Tomato cytosol 75.6 73.96
KRH12101 Soybean plastid 76.16 73.37
KRH37058 Soybean plastid 76.25 73.27
OQU77834 Sorghum endoplasmic reticulum, golgi 44.27 69.52
GSMUA_Achr11P... Banana mitochondrion 10.91 67.05
TraesCS1D01G230100.1 Wheat cytosol, nucleus, peroxisome 69.5 66.49
TraesCS1B01G242500.1 Wheat cytosol, nucleus, peroxisome 69.41 66.4
TraesCS1A01G228300.1 Wheat cytosol, nucleus, peroxisome 68.11 66.22
KXG32384 Sorghum cytosol, nucleus, peroxisome 68.58 66.19
Zm00001d009075_P001 Maize cytosol, nucleus, peroxisome 57.76 65.86
Zm00001d037946_P001 Maize cytosol, mitochondrion, nucleus, peroxisome 68.95 64.37
HORVU1Hr1G059050.25 Barley plastid 67.19 62.51
CDY18811 Canola cytosol, nucleus, peroxisome 59.98 61.99
OQU77836 Sorghum cytosol 26.34 59.5
Os05t0358700-01 Rice cytosol, plasma membrane 7.12 44.25
CDY70643 Canola cytosol, peroxisome 5.55 28.17
CDY28756 Canola cytosol, extracellular 3.05 26.19
CDX88175 Canola cytosol 17.84 26.05
CDY05351 Canola cytosol 19.5 25.89
CDY05490 Canola cytosol 19.5 25.89
CDY20149 Canola cytosol, nucleus, peroxisome 5.08 25.82
CDX80505 Canola cytosol 18.58 25.77
CDY47540 Canola cytosol 18.76 25.0
CDY30108 Canola cytosol 18.48 24.69
CDX97705 Canola cytosol 18.48 24.69
CDY21865 Canola cytosol 18.48 24.63
CDY60551 Canola cytosol 18.48 24.63
CDY13283 Canola mitochondrion 7.95 24.36
CDY24051 Canola cytosol 17.01 24.27
CDY33065 Canola cytosol 16.91 24.14
CDX72557 Canola cytosol 18.48 23.12
CDY35793 Canola cytosol 18.39 23.01
CDY47037 Canola cytosol 18.76 22.94
CDY67335 Canola cytosol 18.3 22.86
CDY64184 Canola mitochondrion 17.19 22.82
CDY41630 Canola cytosol 18.11 22.61
CDX90807 Canola cytosol 16.82 22.55
CDY41006 Canola mitochondrion 3.23 22.44
CDX90808 Canola cytosol 16.27 22.17
CDX86742 Canola cytosol 17.01 21.72
CDY20148 Canola cytosol, peroxisome, plastid 7.49 20.3
CDX87920 Canola cytosol 6.19 19.53
CDX90066 Canola cytosol 17.56 19.51
CDY52961 Canola cytosol, nucleus, peroxisome 17.47 19.05
CDY54926 Canola cytosol, nucleus, peroxisome 17.56 18.94
CDY63527 Canola cytosol 5.82 18.86
CDY42882 Canola nucleus 5.55 18.63
CDY51545 Canola cytosol 2.4 18.18
CDY13284 Canola cytosol 7.67 18.08
CDY15144 Canola peroxisome 17.74 18.05
CDY46254 Canola cytosol 1.48 16.49
CDX80734 Canola cytosol 1.76 15.7
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.30.29.30Gene3D:3.30.870.10MapMan:5.7.2.4.5GO:A0A078DS52
EnsemblPlants:CDX92096ProteinID:CDX92096ProteinID:CDX92096.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004630GO:GO:0006629GO:GO:0006654GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016787GO:GO:0048017EnsemblPlantsGene:GSBRNA2T00153784001
InterPro:IPR001736InterPro:IPR001849InterPro:IPR011993PFAM:PF00614PFAM:PF13091InterPro:PH-like_dom_sf
InterPro:PH_domainPIRSF:PIRSF009376InterPro:PLD-like_domInterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_eukInterPro:PLipase_D_fam
PFscan:PS50003PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF111MetaCyc:PWY-3561MetaCyc:PWY-7039
SMART:SM00155SMART:SM00233SUPFAM:SSF50729SUPFAM:SSF56024UniParc:UPI0004EDF404SEG:seg
Description
BnaA05g23110D
Coordinates
chrLK031871:+:156402..163980
Molecular Weight (calculated)
122798.0 Da
IEP (calculated)
6.924
GRAVY (calculated)
-0.448
Length
1082 amino acids
Sequence
(BLAST)
0001: MASEQLMSPA GGGGRYFQMQ PEQIPSMVSS LFSFAPAPTQ EANRIFEELP KAVIVSVSRP DASDISPFKW QLVKKASQVF YLHFALKKRA FIEEIHEKQE
0101: QVKEWLQNLG IGDHAPIVQD EDVDEVQLHQ EESAKNRDVP SSAALPVIRP LGRQQSISVR GKHAMQEYLN HFLGNLDIVN SREVCRFLEV SMLSFSPEYG
0201: PKLKEDYIMV KHLPKISKSD DSDRCCGCCW FCCCNDNWQK VWGVLKPGFL ALLEDPFDPK LLDIIVFDVL PVSNGNDGAD VSLAVELKDH NPLRHAFKVT
0301: SGNRSIRIRA KSSAKVKDWV ASINDAALRP PEGWCHPHRF GSFAPPRGLT DDGSQAQWFV DGGAAFAAMA AAIENAKSEI FICGWWVCPE LYLRRPYDSH
0401: TSSRLDNLLE NKAKQGVQIY ILIYKEVALA LKINSVYSKR RLLSIHENVR VLRYPDHFSS GVYLWSHHEK LVIVDHQVCF IGGLDLCFGR YDTFEHKVGD
0501: NPSVTWPGKD YYNPRESEPN TWEDALKDEL DRRKYPRMPW HDVHCALWGP PCRDVARHFV QRWNYAKRNK APYEDSIPLL MPQHHMVIPH YMGRQEESDI
0601: ECKNDEDSIK GIRREDSFSS GSSLQDIPLL LPQEPVDEDG SSRGHKANGT NSRNGPFSFR KSKIEPVVGD TPMRGFVDDR NGLHLPVAKR GSNSIDSEWW
0701: ETQERGYQVG SPDESGQVGP RTSCRCQIIR SVSQWSAGTS QVEESIHSAY RSLIDKAEHF IYIENQFFIS GLSGDDTIKN RVLEALYKRI LRAHNEKKSF
0801: RVVVVIPLLP GFQGGIDDSG AASVRAIMHW QYRTMYRGHN SILNNLYKTV GPKANDYISF YGLRAYGKLS EDGPVATSQV YVHSKIMIID DRAALIGSAN
0901: INDRSLLGSR DSEIGVLIED KELVDSRMAG KPWKAGKFSL SLRLSLWSEH LGLRSGEIDQ IIDPVSDSTY KEIWMATAKT NTMIYQDVFS CVPNDLIHSR
1001: MAFRQSISYW KEKLGHTTID LGIAPEKLES YHNGDIKRSD PMDRLKSIKG HLVSFPLDFM CKEDLRPFFN ESEYYASAQV FH
Best Arabidopsis Sequence Match ( AT3G16785.1 )
(BLAST)
0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH
Arabidopsis Description
PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.