CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47037	Canola	cytosol	97.8	95.59
AT4G35790.1	Thale cress	cytosol	85.43	85.14
CDY67335	Canola	cytosol	78.5	78.41
CDY41630	Canola	cytosol	78.38	78.2
KRH28860	Soybean	mitochondrion	69.94	69.86
KRH76589	Soybean	extracellular	69.6	69.68
VIT_00s0264g00100.t01	Wine grape	cytosol	70.06	69.42
PGSC0003DMT400009253	Potato	cytosol	20.58	68.2
Solyc02g083340.2.1	Tomato	nucleus	68.21	68.13
Solyc02g061850.2.1	Tomato	cytosol	66.47	67.65
PGSC0003DMT400009250	Potato	cytosol	42.43	66.37
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	11.79	66.23
GSMUA_Achr1P07360_001	Banana	cytosol	55.84	65.98
Os09t0543100-02	Rice	plasma membrane	63.47	64.29
GSMUA_AchrUn_...	Banana	cytosol	63.58	64.1
KXG36094	Sorghum	cytosol	63.35	63.8
TraesCS5B01G336100.1	Wheat	cytosol	62.66	62.88
TraesCS5A01G337100.2	Wheat	cytosol	62.66	62.88
GSMUA_Achr1P14920_001	Banana	plastid	57.69	62.85
Zm00001d006257_P009	Maize	cytosol	62.08	62.73
TraesCS5D01G341800.2	Wheat	cytosol	59.88	62.56
CDY35793	Canola	cytosol	61.73	61.73
HORVU5Hr1G084740.4	Barley	plastid	50.29	60.84
GSMUA_Achr9P21120_001	Banana	nucleus	17.46	59.92
GSMUA_Achr11P...	Banana	cytosol	56.88	59.13
Zm00001d022594_P002	Maize	cytosol	59.65	58.31
CDY13283	Canola	mitochondrion	22.31	54.67
CDY28756	Canola	cytosol, extracellular	7.86	53.97
CDY41006	Canola	mitochondrion	9.6	53.21
CDX80734	Canola	cytosol	7.4	52.89
CDY51545	Canola	cytosol	8.55	51.75
CDX90807	Canola	cytosol	48.09	51.55
CDX86742	Canola	cytosol	49.83	50.89
CDY42882	Canola	nucleus	18.61	50.0
CDY64184	Canola	mitochondrion	46.71	49.57
CDX90808	Canola	cytosol	45.32	49.37
OQU84227	Sorghum	cytosol	51.45	48.42
TraesCS6B01G096200.1	Wheat	cytosol	48.09	48.09
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	48.09	47.87
CDY46254	Canola	cytosol	5.32	47.42
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	50.87	47.26
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	47.05	46.84
CDX88175	Canola	cytosol	39.77	46.42
CDY30108	Canola	cytosol	43.01	45.93
CDX97705	Canola	cytosol	43.01	45.93
CDX80505	Canola	cytosol	41.04	45.51
CDY13284	Canola	cytosol	24.05	45.32
CDY21865	Canola	cytosol	42.31	45.07
CDY47540	Canola	cytosol	42.2	44.95
CDX90066	Canola	cytosol	50.52	44.87
CDY20149	Canola	cytosol, nucleus, peroxisome	10.98	44.6
CDY60551	Canola	cytosol	41.62	44.34
CDY05351	Canola	cytosol	41.73	44.29
CDY05490	Canola	cytosol	41.39	43.93
CDY52961	Canola	cytosol, nucleus, peroxisome	49.94	43.55
CDY54926	Canola	cytosol, nucleus, peroxisome	50.06	43.17
CDY70643	Canola	cytosol, peroxisome	10.29	41.78
CDY20148	Canola	cytosol, peroxisome, plastid	19.08	41.35
CDY15144	Canola	peroxisome	50.52	41.07
CDX87920	Canola	cytosol	15.84	39.94
CDY63527	Canola	cytosol	15.38	39.82
CDY33065	Canola	cytosol	33.29	37.99
CDY24051	Canola	cytosol	32.95	37.6
Os02t0120200-01	Rice	extracellular	24.51	23.3
CDY18811	Canola	cytosol, nucleus, peroxisome	22.54	18.62
CDX92096	Canola	nucleus	23.12	18.48
CDX95904	Canola	cytosol, nucleus, peroxisome	23.12	18.38
CDY51604	Canola	cytosol	2.77	8.51

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	GO:A0A078C6U5	InterPro:C2_dom
EnsemblPlants:CDX72557	ProteinID:CDX72557	ProteinID:CDX72557.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00100095001
InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EE9C08	SEG:seg	:	:

Description

BnaC07g45790D

Coordinates

chrLK031796:-:1849465..1853282

Molecular Weight (calculated)

98147.0 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.487

Length

865 amino acids

Sequence
(BLAST)

001: MAEKPTDDVM LLHGDLDLTI VQARKLPNMD TFSNHLRLCL TVCTNPTTTD EEEDRRARDG LPPPPQPQPS NARSHRKVIT SDPYVTVVVP QATLARTRVL
101: KNSQDPKWDE HFTISIAHPM SHLEFQVKDD DVFGAQIIGT AKIPVKDIAS GSPVKGWFPI LGASGKPPKK ETALYIEMKF TPFDQIHTYR SGIAGVKGTY
201: FPVRKGSQVR LYQDAHVMDG MLPEIGLDGG KVYQHGKCWE DICYAVSEAH HMIYVVGWSV FHKVKLVREP TRKLPRGGDL TLGELLKYKS EEGVRVLLLV
301: WDDKTSHDKF GIRTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASLPHSS VVGTLFTHHQ KCVLVDTQAA GNNRKVTAFL GGIDLCDGRY
401: DTPEHRILHD LDTVFKDDFH NPTYPVGTKA PRQPWHDLHC RLEGPAAYDV LMNFEQRWRK ATRWKEFSLR LKGKTHWQDD ALIRIGRISW ILSPVFKYLK
501: DGTNMVPEDD PIVYVSKEDD PENWHVQVFR SIDSGSLKGF PKYEDEAKSQ NLESAKRLVV DKSIQTAYIQ TIRSAQHFIY IENQYFLGSS YAWPNYKDAA
601: GADNLIPMEL ALKIVSKIRA KERFSVYVVI PLWPEGDPKS GPVQEILYWQ SQTMQMMYDV IARELKAVES DAHPLDYLNF YCLGKRERFP DDKPDTNGSA
701: ESDSYRFQRF MIYVHAKGMI VDDEYVLMGS ANINQRSMAG TKDTEIAMGA YQPHHTWTNK GKHPRGQVYG YRMSLWAEHL GKTGDEFVEP GDLECVRNVN
801: ETAEGNWKKF IDPKFSELQG HLIKYPLQVD VDGKVSSLPD YDSFPDVGGK IIGAHSMALP DTLTT

Best Arabidopsis Sequence Match ( AT4G35790.1 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC
401: DGRYDTPEHR ILHDLDTVFK DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH WQDDALIRIG RISWILSPVF
501: KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601: RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN
701: GSVVSDSYNF QRFMIYVHAK GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA EHLGKTGDEF VEPSDLECLK
801: KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP LPDYETFPDV GGKIIGAHSM ALPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.