Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92096 | Canola | nucleus | 89.9 | 94.64 |
| CDX95904 | Canola | cytosol, nucleus, peroxisome | 89.73 | 93.93 |
| Bra022178.1-P | Field mustard | cytosol, nucleus, peroxisome | 88.06 | 93.56 |
| CDY51604 | Canola | cytosol | 22.04 | 89.01 |
| VIT_05s0077g01830.t01 | Wine grape | cytosol | 72.96 | 74.73 |
| Solyc01g065720.2.1 | Tomato | cytosol | 71.82 | 73.96 |
| KRH12101 | Soybean | plastid | 72.08 | 73.11 |
| KRH37058 | Soybean | plastid | 72.17 | 73.0 |
| OQU77834 | Sorghum | endoplasmic reticulum, golgi | 41.7 | 68.94 |
| TraesCS1D01G230100.1 | Wheat | cytosol, nucleus, peroxisome | 66.81 | 67.29 |
| TraesCS1B01G242500.1 | Wheat | cytosol, nucleus, peroxisome | 66.73 | 67.2 |
| Zm00001d009075_P001 | Maize | cytosol, nucleus, peroxisome | 55.93 | 67.12 |
| KXG32384 | Sorghum | cytosol, nucleus, peroxisome | 66.02 | 67.08 |
| TraesCS1A01G228300.1 | Wheat | cytosol, nucleus, peroxisome | 64.71 | 66.22 |
| Zm00001d037946_P001 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 67.08 | 65.92 |
| GSMUA_Achr11P... | Banana | mitochondrion | 10.18 | 65.91 |
| AT3G05630.1 | Thale cress | cytosol | 58.82 | 64.05 |
| HORVU1Hr1G059050.25 | Barley | plastid | 63.83 | 62.51 |
| OQU77836 | Sorghum | cytosol | 26.08 | 62.0 |
| Os05t0358700-01 | Rice | cytosol, plasma membrane | 7.64 | 50.0 |
| AT1G52570.1 | Thale cress | cytosol | 18.09 | 25.43 |
| AT3G15730.1 | Thale cress | cytosol | 18.09 | 25.43 |
| AT5G25370.2 | Thale cress | cytosol | 17.91 | 24.88 |
| AT4G35790.1 | Thale cress | cytosol | 18.26 | 23.96 |
| AT1G55180.1 | Thale cress | cytosol | 15.98 | 23.88 |
| AT4G11830.2 | Thale cress | cytosol | 16.42 | 21.85 |
| AT4G11850.1 | Thale cress | cytosol | 16.24 | 21.56 |
| AT4G11840.1 | Thale cress | cytosol | 16.07 | 21.13 |
| AT4G00240.1 | Thale cress | cytosol | 16.59 | 20.39 |
| AT2G42010.2 | Thale cress | peroxisome | 16.77 | 17.24 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.30.29.30 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.5 | EntrezGene:820932 |
| UniProt:A0A1I9LQ40 | ProteinID:ANM64698.1 | ArrayExpress:AT3G16785 | EnsemblPlantsGene:AT3G16785 | RefSeq:AT3G16785 | TAIR:AT3G16785 |
| RefSeq:AT3G16785-TAIR-G | EnsemblPlants:AT3G16785.4 | Unigene:At.21958 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004630 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006629 |
| GO:GO:0006654 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0035091 |
| GO:GO:0048017 | GO:GO:0070290 | InterPro:IPR001736 | InterPro:IPR001849 | InterPro:IPR011993 | RefSeq:NP_001326709.1 |
| PFAM:PF00614 | PFAM:PF13091 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PIRSF:PIRSF009376 | InterPro:PLD-like_dom |
| Symbol:PLDP1 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_euk | InterPro:PLipase_D_fam | PFscan:PS50003 | PFscan:PS50035 |
| PANTHER:PTHR18896 | PANTHER:PTHR18896:SF111 | SMART:SM00155 | SMART:SM00233 | SUPFAM:SSF50729 | SUPFAM:SSF56024 |
| UniParc:UPI000849355D | SEG:seg | : | : | : | : |
Description
PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
Coordinates
chr3:+:5710935..5719192
Molecular Weight (calculated)
129689.0 Da
IEP (calculated)
6.915
GRAVY (calculated)
-0.433
Length
1139 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRYNSGLS FLSSPLATII IPFETKRFRI MINPWHWIVK SLEYIRRMAF RQSLSYWKEK LGHTTIDLGI APEKLESYHN GDIKRSDPMD
1101: RLKAIKGHLV SFPLDFMCKE DLRPVFNESE YYASPQVFH
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRYNSGLS FLSSPLATII IPFETKRFRI MINPWHWIVK SLEYIRRMAF RQSLSYWKEK LGHTTIDLGI APEKLESYHN GDIKRSDPMD
1101: RLKAIKGHLV SFPLDFMCKE DLRPVFNESE YYASPQVFH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.