Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30108 | Canola | cytosol | 94.69 | 94.69 |
| CDX97705 | Canola | cytosol | 94.2 | 94.2 |
| Bra027209.1-P | Field mustard | cytosol | 94.07 | 94.07 |
| CDY20149 | Canola | cytosol, nucleus, peroxisome | 24.44 | 92.96 |
| CDY21865 | Canola | cytosol | 91.85 | 91.63 |
| Bra021132.1-P | Field mustard | cytosol | 91.85 | 91.63 |
| AT1G52570.1 | Thale cress | cytosol | 88.52 | 88.52 |
| CDY20148 | Canola | cytosol, peroxisome, plastid | 41.6 | 84.46 |
| VIT_09s0002g06760.t01 | Wine grape | cytosol | 81.11 | 80.91 |
| PGSC0003DMT400073469 | Potato | cytosol | 78.89 | 78.99 |
| TraesCS3A01G130000.1 | Wheat | plastid | 78.64 | 78.45 |
| TraesCS3B01G149100.1 | Wheat | unclear | 78.64 | 78.45 |
| TraesCS3D01G130900.1 | Wheat | golgi | 78.64 | 78.45 |
| HORVU3Hr1G024530.2 | Barley | plastid | 78.52 | 78.33 |
| Solyc06g068090.2.1 | Tomato | plastid | 77.9 | 78.0 |
| KXG31749 | Sorghum | cytosol | 78.15 | 77.96 |
| Os01t0172400-03 | Rice | plastid | 78.15 | 77.96 |
| Zm00001d039670_P004 | Maize | cytosol | 77.78 | 77.59 |
| Zm00001d008727_P002 | Maize | cytosol | 77.53 | 77.34 |
| GSMUA_Achr7P10170_001 | Banana | cytosol | 51.48 | 77.22 |
| KRH09736 | Soybean | cytosol, endoplasmic reticulum, nucleus | 67.28 | 76.65 |
| EES17463 | Sorghum | cytosol | 76.67 | 76.38 |
| PGSC0003DMT400001650 | Potato | cytosol, plastid | 74.94 | 74.85 |
| Solyc03g116620.2.1 | Tomato | plastid | 74.07 | 73.98 |
| TraesCS1D01G116700.1 | Wheat | cytosol | 71.73 | 71.29 |
| OQU77524 | Sorghum | plastid | 72.22 | 71.25 |
| TraesCS1A01G115300.1 | Wheat | cytosol | 71.48 | 71.04 |
| Os05t0171000-01 | Rice | plasma membrane | 71.85 | 70.63 |
| TraesCS1B01G135200.1 | Wheat | cytosol | 70.49 | 69.8 |
| KRH09735 | Soybean | cytosol | 39.51 | 68.97 |
| HORVU1Hr1G025370.1 | Barley | cytosol | 71.85 | 68.07 |
| Zm00001d037643_P001 | Maize | cytosol | 71.23 | 63.69 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 35.8 | 63.46 |
| AT5G25370.2 | Thale cress | cytosol | 61.23 | 60.49 |
| AT4G11830.2 | Thale cress | cytosol | 45.19 | 42.76 |
| AT4G11850.1 | Thale cress | cytosol | 45.19 | 42.66 |
| AT4G11840.1 | Thale cress | cytosol | 45.31 | 42.38 |
| AT4G35790.1 | Thale cress | cytosol | 45.06 | 42.05 |
| AT1G55180.1 | Thale cress | cytosol | 38.64 | 41.08 |
| AT4G00240.1 | Thale cress | cytosol | 44.94 | 39.27 |
| AT2G42010.2 | Thale cress | peroxisome | 45.93 | 33.57 |
| AT3G05630.1 | Thale cress | cytosol | 24.81 | 19.22 |
| AT3G16785.4 | Thale cress | plastid | 25.43 | 18.09 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.1 | EntrezGene:820816 |
| UniProt:A0A178VKX2 | ProteinID:AEE75720.1 | EMBL:AF428278 | EMBL:AK226887 | ArrayExpress:AT3G15730 | EnsemblPlantsGene:AT3G15730 |
| RefSeq:AT3G15730 | TAIR:AT3G15730 | RefSeq:AT3G15730-TAIR-G | EnsemblPlants:AT3G15730.1 | TAIR:AT3G15730.1 | Unigene:At.23882 |
| ProteinID:BAB02304.1 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
| GO:GO:0004630 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005546 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006631 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009056 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009653 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009789 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009873 |
| GO:GO:0009987 | GO:GO:0010119 | GO:GO:0010358 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 |
| GO:GO:0030136 | GO:GO:0030234 | GO:GO:0031090 | GO:GO:0031410 | GO:GO:0031966 | GO:GO:0043231 |
| GO:GO:0043547 | GO:GO:0046470 | GO:GO:0046686 | GO:GO:0070290 | InterPro:IPR000008 | InterPro:IPR001736 |
| InterPro:IPR035892 | RefSeq:NP_188194.1 | ProteinID:OAP06506.1 | PFAM:PF00168 | PFAM:PF00614 | PFAM:PF12357 |
| PIRSF:PIRSF036470 | Symbol:PLDALPHA1 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam | InterPro:PLipase_D_pln |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50035 | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF109 |
| UniProt:Q38882 | SMART:SM00155 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 | EMBL:U36381 |
| UniParc:UPI0000131474 | : | : | : | : | : |
Description
PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
Coordinates
chr3:+:5330194..5333745
Molecular Weight (calculated)
91853.1 Da
IEP (calculated)
5.705
GRAVY (calculated)
-0.400
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.