CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
extracellular 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31749	Sorghum	cytosol	92.5	92.61
Zm00001d039670_P004	Maize	cytosol	91.88	92.0
Zm00001d008727_P002	Maize	cytosol	91.39	91.5
Os01t0172400-03	Rice	plastid	87.58	87.68
TraesCS3B01G149100.1	Wheat	unclear	87.21	87.32
HORVU3Hr1G024530.2	Barley	plastid	86.96	87.07
TraesCS3D01G130900.1	Wheat	golgi	86.72	86.82
TraesCS3A01G130000.1	Wheat	plastid	86.72	86.82
KRH23570	Soybean	endoplasmic reticulum	79.46	80.05
KRH44445	Soybean	cytosol	77.37	79.82
KRH47460	Soybean	cytosol	79.34	79.73
VIT_09s0002g06760.t01	Wine grape	cytosol	78.6	78.69
AT3G15730.1	Thale cress	cytosol	76.38	76.67
CDX97705	Canola	cytosol	75.89	76.17
Bra027209.1-P	Field mustard	cytosol	75.89	76.17
CDY21865	Canola	cytosol	76.01	76.11
OQU77524	Sorghum	plastid	76.75	76.0
AT1G52570.1	Thale cress	cytosol	75.65	75.93
CDY30108	Canola	cytosol	75.65	75.93
Bra040960.1-P	Field mustard	cytosol	75.65	75.74
Bra021132.1-P	Field mustard	cytosol	75.52	75.62
CDY47540	Canola	cytosol	75.52	75.62
CDY60551	Canola	cytosol	75.03	75.12
Bra030375.1-P	Field mustard	cytosol	75.03	75.12
CDY20149	Canola	cytosol, nucleus, peroxisome	19.68	75.12
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	65.56	74.96
Solyc08g066800.2.1	Tomato	plastid	73.92	74.47
PGSC0003DMT400024831	Potato	extracellular	73.92	74.47
Solyc08g066790.2.1	Tomato	plastid	72.69	73.23
CDX87920	Canola	cytosol	30.26	71.72
EER88618	Sorghum	cytosol	71.83	71.57
CDY63527	Canola	cytosol	29.27	71.26
PGSC0003DMT400024828	Potato	cytosol	10.95	70.08
GSMUA_Achr10P...	Banana	cytosol, plastid	39.11	69.58
CDY20148	Canola	cytosol, peroxisome, plastid	34.07	69.42
KRH09735	Soybean	cytosol	38.01	66.59
EES10287	Sorghum	cytosol	62.12	60.26
KXG39222	Sorghum	cytosol, peroxisome, vacuole	60.52	58.22
EER98913	Sorghum	cytosol	51.05	50.18
EER98315	Sorghum	cytosol	46.99	45.53
KXG36094	Sorghum	cytosol	47.36	44.82
KXG40331	Sorghum	cytosol	43.91	43.22
OQU84227	Sorghum	cytosol	44.53	39.39
EER92041	Sorghum	cytosol, nucleus, peroxisome	44.77	34.57
OQU77834	Sorghum	endoplasmic reticulum, golgi	18.94	22.35
KXG32384	Sorghum	cytosol, nucleus, peroxisome	24.35	17.66
OQU77836	Sorghum	cytosol	7.26	12.32

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:8071513
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5YSV6	EnsemblPlants:EES17463	ProteinID:EES17463	ProteinID:EES17463.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	EnsemblPlantsGene:SORBI_3008G183400	SUPFAM:SSF49562
SUPFAM:SSF56024	unigene:Sbi.3479	UniParc:UPI0001A88B16	RefSeq:XP_002443625.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:61702527..61711466

Molecular Weight (calculated)

92440.0 Da

IEP (calculated)

6.257

GRAVY (calculated)

-0.427

Length

813 amino acids

Sequence
(BLAST)

001: MAEMSLLHGT LHATIFEAAS LSNPQRASGR APKFIRKLVE GIEESVGVGK GSTKIYATID LEKTRVGRTR IISNEPVNPR WYESFHIYCA HRAANVIFTV
101: KIDNPIGASL IGRAYMPVAD ILVGEEIDKW LEICDDKREP IGHSKIHVKI QYFDVSKDCN WARGVQSKKY PGVPYTFFSQ RQGCKVTLYQ DAHVPDNFVP
201: RIPLADGKNY EPQRCWEDIF DAISKAQHLI YITGWSVYTE ITLVRDTNRP KPGGDVTLGE LLKRKASEGV RVLMLVWDDR TSVGLLKKDG HMATHDEETA
301: NYFHGTDVNC VLCGRNPDDS GSLVQDLQIS TMFTHHQKIV VVDHELPNHG SQRRRIVSFI GGIDLCDGRY DTQYHSLFRT LDTVHHDDFN QPNFGGGSIK
401: KGGPREPWHD IHSRLEGPIA WDVLYNFEQR WRKQGGKDLL VRLRDLSDII IPPSPVMFPE DRETWNVQLF RSIDGGAAFG FPETPEDAAR AGLVSGKDQI
501: IDRSIQDAYI NAIRRAKNFI YIENQYFLGS SYGWKPQGIK PEEIGALHLI PKELSLKIVS KIEAGERFTV YVVVPMWPEG VPESFSVQPI LDWQRRTMEM
601: MYTDITQALH AKGIEANPKD YLTFFCLGNR EVKQEGEYEP EEHPEPDTDY IRAQESRRFM IYVHSKMMIV DDEYIIVGSA NINQRSMDGA RDSEIAMGAY
701: QPYHLATKQP ARGQIHGFRM SLWYEHLGML DDVFQHPESM ECVQKVNRIA DKYWDLYTSD DLEQDLPGHL LSYPIGVTAD GTVTALPGMD NFPDTRARVL
801: GNKTIYIPTI LTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.