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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • plastid 2
  • vacuole 2
  • endoplasmic reticulum 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039670_P004 Maize cytosol 96.31 96.31
Zm00001d008727_P002 Maize cytosol 95.57 95.57
EES17463 Sorghum cytosol 92.61 92.5
Os01t0172400-03 Rice plastid 91.01 91.01
HORVU3Hr1G024530.2 Barley plastid 90.27 90.27
TraesCS3A01G130000.1 Wheat plastid 90.15 90.15
TraesCS3B01G149100.1 Wheat unclear 90.02 90.02
TraesCS3D01G130900.1 Wheat golgi 89.9 89.9
KRH44445 Soybean cytosol 79.68 82.11
KRH47460 Soybean cytosol 81.65 81.95
KRH23570 Soybean endoplasmic reticulum 81.4 81.91
VIT_09s0002g06760.t01 Wine grape cytosol 80.91 80.91
AT3G15730.1 Thale cress cytosol 77.96 78.15
CDY21865 Canola cytosol 77.96 77.96
CDX97705 Canola cytosol 77.71 77.9
Bra027209.1-P Field mustard cytosol 77.71 77.9
CDY30108 Canola cytosol 77.59 77.78
OQU77524 Sorghum plastid 78.45 77.59
CDY20149 Canola cytosol, nucleus, peroxisome 20.32 77.46
Bra021132.1-P Field mustard cytosol 77.46 77.46
AT1G52570.1 Thale cress cytosol 77.09 77.28
PGSC0003DMT400024831 Potato extracellular 76.6 77.08
Bra040960.1-P Field mustard cytosol 76.97 76.97
KRH09736 Soybean cytosol, endoplasmic reticulum, nucleus 67.36 76.93
CDY47540 Canola cytosol 76.85 76.85
Solyc08g066800.2.1 Tomato plastid 76.35 76.83
CDY60551 Canola cytosol 76.35 76.35
Bra030375.1-P Field mustard cytosol 76.23 76.23
Solyc08g066790.2.1 Tomato plastid 74.51 74.97
PGSC0003DMT400024828 Potato cytosol 11.58 74.02
CDX87920 Canola cytosol 30.3 71.72
CDY63527 Canola cytosol 29.43 71.56
EER88618 Sorghum cytosol 71.67 71.32
CDY20148 Canola cytosol, peroxisome, plastid 34.98 71.18
GSMUA_Achr10P... Banana cytosol, plastid 40.02 71.12
KRH09735 Soybean cytosol 39.16 68.53
EES10287 Sorghum cytosol 62.19 60.26
KXG39222 Sorghum cytosol, peroxisome, vacuole 61.95 59.53
EER98913 Sorghum cytosol 51.48 50.54
EER98315 Sorghum cytosol 47.91 46.36
KXG36094 Sorghum cytosol 47.78 45.17
KXG40331 Sorghum cytosol 44.21 43.46
OQU84227 Sorghum cytosol 44.46 39.28
EER92041 Sorghum cytosol, nucleus, peroxisome 44.83 34.57
OQU77834 Sorghum endoplasmic reticulum, golgi 19.09 22.5
KXG32384 Sorghum cytosol, nucleus, peroxisome 25.0 18.11
OQU77836 Sorghum cytosol 7.64 12.94
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.1UniProt:A0A1B6Q1F1
InterPro:C2_domInterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488
GO:GO:0005509GO:GO:0005575GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016020GO:GO:0016042GO:GO:0016787GO:GO:0046470GO:GO:0070290
InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892EnsemblPlants:KXG31749ProteinID:KXG31749ProteinID:KXG31749.1
ProteinID:KXG31750.1PFAM:PF00168PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_plnPFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF67
MetaCyc:PWY-3561MetaCyc:PWY-7039SMART:SM00155SMART:SM00239EnsemblPlantsGene:SORBI_3003G050400SUPFAM:SSF49562
SUPFAM:SSF56024UniParc:UPI0001C809F6SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:4583543..4588467
Molecular Weight (calculated)
92553.9 Da
IEP (calculated)
5.380
GRAVY (calculated)
-0.442
Length
812 amino acids
Sequence
(BLAST)
001: MAQILLHGTL HATIFEAESL SNPHRASGGA PKFIRKLVEG IEDTVGVGKG STKIYATIDL EKARVGRTRM ISNEPINPRW YESFHIYCAH MAADVIFTVK
101: IDNPIGASLI GRAYLPVTDL LDGEEIDKWL EICDENREPI GDSKIHVKLQ YFDVFKDRNW ARGVRSTKYP GVPYTFFSQR QGCKVTLYQD AHVPDNFVPK
201: IPLADGKNYE PHRCWEDIFD AISKAQHLIY ITGWSVYTEI TLVRDTNRPK PGGDVTLGEL LKRKASEGVR VNMLVWDDRT SVGLLKKDGL MATHDEETAN
301: YFHDTEVNCV LCPRNPDDSG SFVQDLQIST MFTHHQKIVV VDHELPNEGS QQRRIVSFIG GIDLCDGRYD TQYHSLFRTL DSVHHDDFHQ PNFEGGSIKK
401: GGPREPWHDI HSRLEGPIAW DVLYNFEQRW RKQGGKDLLV RLRDLSDIII PPSPVMFPED RETWNVQLFR SIDGGAAFGF PETPEEAARA GLVSGKDQII
501: DRSIQDAYIN AIRRAKNFIY IENQYFLGSS YGWKAEGIKP EEIGALHLIP KELSLKIVSK IEAGERFTVY VVVPMWPEGV PESASVQAIL DWQRRTMDMM
601: YTDITQALQA KGIEANPKEY LTFFCLGNRE VKQEGEYEPE EHPEPDTDYI RAQEARRFMI YVHTKMMIVD DEYIIIGSAN INQRSMDGAR DSEIAMGAYQ
701: PYHLATRQPA RGQIHGFRMS LWYEHLGMLD DVFQRPESVE CVQKVNRIAE KYWDLYSSDD LEQDLPGHLL MYPIGVTADG TVTELPGMEN FPDTRARVLG
801: NKSDYLPPIL TT
Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)
001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT
Arabidopsis Description
PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.