Factsheet for AT1G52570.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040960.1-P	Field mustard	cytosol	93.46	93.23
CDY47540	Canola	cytosol	93.33	93.1
CDY60551	Canola	cytosol	93.21	92.98
Bra030375.1-P	Field mustard	cytosol	93.09	92.86
CDX87920	Canola	cytosol	38.64	91.25
CDY63527	Canola	cytosol	37.53	91.02
AT3G15730.1	Thale cress	cytosol	88.52	88.52
VIT_09s0002g06760.t01	Wine grape	cytosol	80.0	79.8
PGSC0003DMT400073469	Potato	cytosol	78.64	78.74
Solyc06g068090.2.1	Tomato	plastid	77.78	77.87
Os01t0172400-03	Rice	plastid	77.65	77.46
KXG31749	Sorghum	cytosol	77.28	77.09
Zm00001d039670_P004	Maize	cytosol	77.16	76.97
TraesCS3A01G130000.1	Wheat	plastid	77.04	76.85
TraesCS3B01G149100.1	Wheat	unclear	77.04	76.85
TraesCS3D01G130900.1	Wheat	golgi	76.91	76.72
GSMUA_Achr7P10170_001	Banana	cytosol	51.11	76.67
HORVU3Hr1G024530.2	Barley	plastid	76.67	76.48
Zm00001d008727_P002	Maize	cytosol	76.54	76.35
EES17463	Sorghum	cytosol	75.93	75.65
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	66.05	75.25
PGSC0003DMT400001650	Potato	cytosol, plastid	74.94	74.85
Solyc03g116620.2.1	Tomato	plastid	74.32	74.23
TraesCS1D01G116700.1	Wheat	cytosol	71.11	70.67
OQU77524	Sorghum	plastid	71.48	70.52
Os05t0171000-01	Rice	plasma membrane	71.6	70.39
TraesCS1A01G115300.1	Wheat	cytosol	70.74	70.31
TraesCS1B01G135200.1	Wheat	cytosol	70.12	69.44
KRH09735	Soybean	cytosol	39.51	68.97
HORVU1Hr1G025370.1	Barley	cytosol	71.11	67.37
Zm00001d037643_P001	Maize	cytosol	70.74	63.24
GSMUA_Achr10P...	Banana	cytosol, plastid	34.81	61.71
AT5G25370.2	Thale cress	cytosol	60.74	60.0
AT4G11830.2	Thale cress	cytosol	44.94	42.52
AT4G11850.1	Thale cress	cytosol	44.94	42.42
AT4G11840.1	Thale cress	cytosol	45.19	42.26
AT1G55180.1	Thale cress	cytosol	38.89	41.34
AT4G35790.1	Thale cress	cytosol	43.7	40.78
AT4G00240.1	Thale cress	cytosol	45.43	39.7
AT2G42010.2	Thale cress	peroxisome	46.42	33.94
AT3G05630.1	Thale cress	cytosol	25.19	19.5
AT3G16785.4	Thale cress	plastid	25.43	18.09

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:841689
ProteinID:AAD55607.1	ProteinID:AEE32825.1	ProteinID:ANM60648.1	ProteinID:ANM60649.1	ArrayExpress:AT1G52570	EnsemblPlantsGene:AT1G52570
RefSeq:AT1G52570	TAIR:AT1G52570	RefSeq:AT1G52570-TAIR-G	EnsemblPlants:AT1G52570.1	TAIR:AT1G52570.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009536
GO:GO:0009719	GO:GO:0009738	GO:GO:0009873	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0030136	GO:GO:0031410	GO:GO:0046470	GO:GO:0070290
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	RefSeq:NP_001322920.1	RefSeq:NP_001322921.1	RefSeq:NP_175666.1
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom
Symbol:PLDALPHA2	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020100	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	UniProt:Q9SSQ9	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000013147F	:	:	:

Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]

Coordinates

chr1:-:19583617..19587428

Molecular Weight (calculated)

91603.1 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.408

Length

810 amino acids

Sequence
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.