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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • vacuole 2
  • cytosol 3
  • endoplasmic reticulum 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88175 Canola cytosol 78.66 87.04
CDY70643 Canola cytosol, peroxisome 22.56 86.85
CDX80505 Canola cytosol 82.44 86.67
CDY05490 Canola cytosol 85.61 86.14
CDY05351 Canola cytosol 85.24 85.77
Bra020497.1-P Field mustard cytosol 85.85 85.64
Bra009836.1-P Field mustard cytosol 83.78 73.71
VIT_04s0008g05450.t01 Wine grape cytosol 59.63 63.02
AT3G15730.1 Thale cress cytosol 60.49 61.23
KRH52443 Soybean cytosol 61.46 61.02
AT1G52570.1 Thale cress cytosol 60.0 60.74
PGSC0003DMT400020297 Potato cytosol 60.61 60.68
KRH52444 Soybean cytosol, plastid 59.02 58.95
Solyc12g011170.1.1 Tomato cytosol 60.12 58.14
KRH61774 Soybean cytosol 24.27 57.02
AT1G55180.1 Thale cress cytosol 39.39 42.39
AT4G11830.2 Thale cress cytosol 43.9 42.06
AT4G11850.1 Thale cress cytosol 43.41 41.49
AT4G11840.1 Thale cress cytosol 43.41 41.11
AT4G35790.1 Thale cress cytosol 42.8 40.44
AT4G00240.1 Thale cress cytosol 44.39 39.27
AT2G42010.2 Thale cress peroxisome 44.15 32.67
AT3G05630.1 Thale cress cytosol 23.29 18.26
AT3G16785.4 Thale cress plastid 24.88 17.91
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.1EntrezGene:832609
EMBL:AC006258ProteinID:AED93432.1ProteinID:ANM70004.1ProteinID:ANM70005.1ProteinID:ANM70006.1ArrayExpress:AT5G25370
EnsemblPlantsGene:AT5G25370RefSeq:AT5G25370TAIR:AT5G25370RefSeq:AT5G25370-TAIR-GEnsemblPlants:AT5G25370.2Unigene:At.54992
InterPro:C2_domInterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488
GO:GO:0005509GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006629
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009414GO:GO:0009628
GO:GO:0009651GO:GO:0009719GO:GO:0009737GO:GO:0009987GO:GO:0016020GO:GO:0016042
GO:GO:0016787GO:GO:0046466GO:GO:0046470GO:GO:0070290InterPro:IPR000008InterPro:IPR001736
InterPro:IPR035892RefSeq:NP_001318645.1RefSeq:NP_001331647.1RefSeq:NP_001331648.1RefSeq:NP_197919.1UniProt:P58766
PFAM:PF00168PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470Symbol:PLDALPHA3InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_plnPFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF89
SMART:SM00155SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0000131529SEG:seg
Description
PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
Coordinates
chr5:-:8803829..8807783
Molecular Weight (calculated)
93367.4 Da
IEP (calculated)
6.819
GRAVY (calculated)
-0.410
Length
820 amino acids
Sequence
(BLAST)
001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.