Factsheet for TraesCS1D01G116700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G115300.1	Wheat	cytosol	98.53	98.53
TraesCS1B01G135200.1	Wheat	cytosol	94.23	93.89
HORVU1Hr1G025370.1	Barley	cytosol	96.93	92.4
Os05t0171000-01	Rice	plasma membrane	85.52	84.59
OQU77524	Sorghum	plastid	84.29	83.68
TraesCS3D01G130900.1	Wheat	golgi	77.42	77.71
Zm00001d037643_P001	Maize	cytosol	83.8	75.39
KRH44445	Soybean	cytosol	70.8	73.22
KRH47460	Soybean	cytosol	72.27	72.81
VIT_09s0002g06760.t01	Wine grape	cytosol	72.52	72.78
AT3G15730.1	Thale cress	cytosol	71.29	71.73
CDY30108	Canola	cytosol	71.04	71.48
KRH23570	Soybean	endoplasmic reticulum	70.67	71.38
AT1G52570.1	Thale cress	cytosol	70.67	71.11
Bra027209.1-P	Field mustard	cytosol	70.67	71.11
CDX97705	Canola	cytosol	70.67	71.11
CDY20149	Canola	cytosol, nucleus, peroxisome	18.53	70.89
PGSC0003DMT400024831	Potato	extracellular	70.18	70.88
Solyc08g066800.2.1	Tomato	plastid	69.94	70.63
CDY21865	Canola	cytosol	70.18	70.44
Bra040960.1-P	Field mustard	cytosol	70.06	70.32
CDY47540	Canola	cytosol	69.94	70.2
Bra030375.1-P	Field mustard	cytosol	69.69	69.95
CDY60551	Canola	cytosol	69.57	69.83
Bra021132.1-P	Field mustard	cytosol	69.57	69.83
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	59.88	68.64
Solyc08g066790.2.1	Tomato	plastid	67.61	68.28
PGSC0003DMT400024828	Potato	cytosol	10.55	67.72
TraesCS7D01G372800.1	Wheat	cytosol	67.48	67.07
CDY63527	Canola	cytosol	25.77	62.87
CDX87920	Canola	cytosol	26.38	62.68
CDY20148	Canola	cytosol, peroxisome, plastid	30.31	61.9
TraesCS1D01G379900.2	Wheat	cytosol	60.86	59.47
KRH09735	Soybean	cytosol	33.25	58.41
TraesCS1D01G035800.2	Wheat	cytosol	55.58	54.78
TraesCS7D01G531300.1	Wheat	cytosol	54.6	54.0
TraesCS7D01G531200.1	Wheat	cytosol	54.23	53.64
TraesCS5D01G231100.1	Wheat	cytosol	48.96	48.07
TraesCS1D01G189300.1	Wheat	cytosol	45.03	45.31
TraesCS5D01G208300.2	Wheat	cytosol	45.52	43.91
TraesCS5D01G524600.1	Wheat	cytosol	45.15	43.81
TraesCS1D01G370600.1	Wheat	cytosol	44.17	43.48
TraesCS4D01G346700.1	Wheat	cytosol	43.8	42.96
TraesCS5D01G341800.2	Wheat	cytosol	43.07	42.39
TraesCS1D01G230100.1	Wheat	cytosol, nucleus, peroxisome	24.66	17.77

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0046470	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF67	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF56024	EnsemblPlantsGene:TraesCS1D01G116700	EnsemblPlants:TraesCS1D01G116700.1	TIGR:cd04015	:

Description

No Description!

Coordinates

chr1D:-:112468106..112473337

Molecular Weight (calculated)

91081.2 Da

IEP (calculated)

6.107

GRAVY (calculated)

-0.379

Length

815 amino acids

Sequence
(BLAST)

001: MARILLHGTL HVTVFEGEGI TNNSRPSSQA PQFLRKLVEG IEDTVGVGKG ASKLYATVGL GKARIGRTRT LNDESSTPRW FESFHIYCAH LATDVLFTIK
101: GSSTIGASVV GTGYLPVRDI YGGDEVERWL PLCDDSRNPV EGGGKIHVKL QYFDISKDRA WGRGIRSGKN PGVPYTFFSQ RQGCKVTLYQ DAHIPDGFIP
201: RIPLDDGRCY EPHRCWEDIF AAISNAKHLI YITGWSVYTE IALLRDANRP KPAGGGVTLG ELLKKKAGEG VRVLMLVWDD RTSVGVLKKD GLMATHDEET
301: MNYFQDTDVH CVLCPRDPDD SGSFVQDLQI STMFTHHQKT VIVDHDMPQS GGGRRRRILS FVGGLDLCDG RYDTPFHPLF GTLDGPHHDD FHQPNFATAA
401: IAKGGPREPW HDIHCRLEGP VAWDVLYNFE QRWRKQGGKD LLVQLRDLAD DIIPPSPVMH AEDREAWNVQ LFRSIDGGAA FGFPDNPEDA AKAGLVSGKD
501: QIIDRSIQDA YICAIRRAKS FIYIENQYFL GSSYCWKRDG IDPDDVGALH LLPKELSMKV VSKIEAGERF TVYVVVPMWP EGIPASGSVQ AILDWQRRTM
601: EMMYSDIAQA IQAKGIDAKP KDYLTFFCLG NREAKKSGEY EPPEQAEPDS DYLKAQQNRR FMIYVHTKMM IVDDEYIIVG SANINQRSMD GARDSEIAMG
701: GYQPGHLATS RPARGQVHGF RMALWYEHLG MMDEAFQRPE SLECVHKVNA MAERYWDLYA ADGPERDLPG HLLTYPVSVT GDGSVTQLPG VEFFPDTEAR
801: ILGGKSDYLP PILTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.