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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • plastid 3
  • cytosol 2
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, extracellular, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, vacuole
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU77524 Sorghum plastid 86.29 86.6
TraesCS1D01G116700.1 Wheat cytosol 84.59 85.52
TraesCS1A01G115300.1 Wheat cytosol 84.34 85.28
HORVU1Hr1G025370.1 Barley cytosol 85.56 82.46
TraesCS1B01G135200.1 Wheat cytosol 81.8 82.4
Os01t0172400-03 Rice plastid 77.79 78.94
Zm00001d037643_P001 Maize cytosol 85.8 78.04
KRH44445 Soybean cytosol 71.48 74.75
KRH47460 Soybean cytosol 72.94 74.29
VIT_09s0002g06760.t01 Wine grape cytosol 72.09 73.15
KRH23570 Soybean endoplasmic reticulum 70.87 72.37
AT3G15730.1 Thale cress cytosol 70.63 71.85
AT1G52570.1 Thale cress cytosol 70.39 71.6
PGSC0003DMT400024831 Potato extracellular 69.66 71.13
Solyc08g066800.2.1 Tomato plastid 69.66 71.13
CDY30108 Canola cytosol 69.9 71.11
CDY21865 Canola cytosol 69.9 70.94
CDX97705 Canola cytosol 69.54 70.74
Bra027209.1-P Field mustard cytosol 69.54 70.74
Bra040960.1-P Field mustard cytosol 69.54 70.57
Bra030375.1-P Field mustard cytosol 69.42 70.44
CDY47540 Canola cytosol 69.42 70.44
KRH09736 Soybean cytosol, endoplasmic reticulum, nucleus 60.68 70.32
CDY60551 Canola cytosol 69.3 70.32
Bra021132.1-P Field mustard cytosol 69.3 70.32
CDY20149 Canola cytosol, nucleus, peroxisome 17.96 69.48
Solyc08g066790.2.1 Tomato plastid 67.23 68.65
PGSC0003DMT400024828 Potato cytosol 10.56 68.5
Os06t0604400-01 Rice plasma membrane 67.48 68.05
Os03t0391400-01 Rice plasma membrane 34.71 65.3
CDX87920 Canola cytosol 26.7 64.14
CDY63527 Canola cytosol 25.73 63.47
CDY20148 Canola cytosol, peroxisome, plastid 30.58 63.16
Os06t0604200-02 Rice cytosol, plasma membrane 62.62 62.02
Os06t0604300-01 Rice plasma membrane 62.86 61.52
KRH09735 Soybean cytosol 33.13 58.84
Os08t0401800-00 Rice plasma membrane 51.34 52.55
Os09t0421300-01 Rice cytosol 48.3 48.71
Os07t0260400-01 Rice cytosol, plasma membrane 46.0 45.23
Os09t0543100-02 Rice plasma membrane 45.87 44.26
Os03t0119100-01 Rice plasma membrane 44.3 43.71
Os10t0524400-01 Rice plasma membrane 43.2 34.03
Os03t0840800-01 Rice cytosol 14.32 33.24
Os02t0120200-01 Rice extracellular 21.6 19.56
Os05t0358700-01 Rice cytosol, plasma membrane 1.7 8.05
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10EntrezGene:4337942MapMan:5.7.2.4.1
ProteinID:AAU44332.1EMBL:AK240654ProteinID:BAS92487.1InterPro:C2_domInterPro:C2_domain_sfProteinID:EEE62492.1
GO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020
GO:GO:0016042GO:GO:0016787GO:GO:0046470GO:GO:0070290InterPro:IPR000008InterPro:IPR001736
InterPro:IPR035892EnsemblPlantsGene:Os05g0171000EnsemblPlants:Os05t0171000-01PFAM:PF00168PFAM:PF00614PFAM:PF12357
PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_plnPFscan:PS50035
PANTHER:PTHR18896PANTHER:PTHR18896:SF67UniProt:Q65XR9SMART:SM00155SMART:SM00239SUPFAM:SSF49562
SUPFAM:SSF56024UniParc:UPI000043F3DCRefSeq:XP_015640163.1RefSeq:XP_015640164.1SEG:seg:
Description
PHOSPHOLIPASE D alpha 2Phospholipase D2 (EC 3.1.4.4). (Os05t0171000-01)
Coordinates
chr5:-:4255849..4260122
Molecular Weight (calculated)
91605.8 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.349
Length
824 amino acids
Sequence
(BLAST)
001: MAKILLHGTM HVTIFEAESL SNPSRPSSQA PQFLRKLVEG IEDTVGVGKG TSKVYATIGL DKARVGRTRT LADDTAAPRW YESFHVYCAH LATHVAFTLK
101: AKNPIGASLL GVGYLPVRDV LAGDEVDRWL PLCDDTDART PIGDGGGKVH VKLQYFDISK DRSWGRGVRS GKYPGVPYTF FSQRQGCKVT LYQDAHVPDG
201: FIPRIPLDGG RSYEPHRCWE DIFDAINGAR HFIYITGWSV YTEIALIRDA DRPKPGGGVT LGELLKKKAG EGVRVLMLVW DDRTSVGMLK KDGLMATHDE
301: ETMNYFQGTE VNCVLCPRNP DDSGSIVQDL QISTMFTHHQ KIVVVDHDMP SSRHGGGNGG GRRRVVSFVG GLDLCDGRYD TPFHSLFRTL GTAHHDDFHQ
401: PNFATATVAK GGPREPWHDI HCRLEGPVAW DVLYNFEQRW RKQGGKDLLV QLRDLAETVI PPSPAMFPED AESWNVQLFR SIDGGAAFGF PDTPEDAARA
501: GLVSGKDQII DRSIQDAYIA AIRRARSFIY IENQYFLGSS YCWKPNDGVK PEDVGALHLI PKELSMKVVS KIEAGERFTV YVVVPMWPEG IPESGSVQAI
601: LDWQRRTMEM MYTDIAHAIQ AKGIDADPKD YLTFFCLGNR EAKSAGEYEP PEQAEPDTGY FHAQQNRRFM IYVHTKMMIV DDEYIIVGSA NINQRSMDGA
701: RDSEIAMGAY QPHHLAAAGR PARGQVHGFR MALWYEHLGT VDEAFQRPES LDCVRKVNAM ADRCWDLYAG DGPERDLPGH LLTYPVGVAG DGTITQLPGV
801: EFFPDTQARI LGAKSDYLPP ILTT
Best Arabidopsis Sequence Match ( AT1G52570.2 )
(BLAST)
001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT
Arabidopsis Description
PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.