CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	93.96	92.65
TraesCS1D01G379900.2	Wheat	cytosol	78.22	79.26
TraesCS1B01G393300.3	Wheat	cytosol	77.99	79.11
HORVU1Hr1G082950.2	Barley	nucleus	77.63	77.73
TraesCS1A01G373100.2	Wheat	plastid	76.45	77.55
HORVU1Hr1G082940.1	Barley	cytosol	74.32	75.48
Os03t0391400-01	Rice	plasma membrane	38.7	74.66
HORVU1Hr1G082890.5	Barley	cytosol	72.31	73.88
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.66	63.08
KXG31749	Sorghum	cytosol	59.53	61.95
EES17463	Sorghum	cytosol	58.22	60.52
OQU77524	Sorghum	plastid	57.99	59.68
EER88618	Sorghum	cytosol	57.28	59.31
EES10287	Sorghum	cytosol	53.49	53.94
EER98913	Sorghum	cytosol	47.93	48.97
EER98315	Sorghum	cytosol	42.37	42.67
KXG36094	Sorghum	cytosol	42.84	42.14
KXG40331	Sorghum	cytosol	40.47	41.4
OQU84227	Sorghum	cytosol	42.25	38.85
EER92041	Sorghum	cytosol, nucleus, peroxisome	40.83	32.76
OQU77834	Sorghum	endoplasmic reticulum, golgi	16.69	20.46
KXG32384	Sorghum	cytosol, nucleus, peroxisome	22.13	16.68
OQU77836	Sorghum	cytosol	6.15	10.86

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	UniProt:A0A1B6QMR6
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	EnsemblPlants:KXG39222	ProteinID:KXG39222	ProteinID:KXG39222.1
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF73	MetaCyc:PWY-3561
MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	EnsemblPlantsGene:SORBI_3001G349800	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0001C80B68	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:63968101..63972778

Molecular Weight (calculated)

93763.2 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.376

Length

845 amino acids

Sequence
(BLAST)

001: MMMAQQPQTT QLLLHGVIDA RILEADLSVT TDGKLQPTKK TLMKKKVFSW IRKLTFCKGQ QQLENAIGLG TDGKLYATVD IDKARVGRTR MVPPVHSPKW
101: DESFHIYCAH DASNIIFTVK ADNAIGATLI GRAYLPTEGV VAGQKVDLWL PIRDEKRQPL EGGDQIRVQL QFTNVAADPT AGWGTGVGSG AYGGVPYTFF
201: KQRRGCRVRL YEDAHVAGDF APRVRLADGS FYEPRRCWVD VFDAINRARR MVYVAGWSVN TDVVLVRDPR EPSSASSENL GELLIRKANE GVAVLMLVWD
301: DRTSVGLGPI KRDGLMATHD QDTESFFRDT RVQCVLCPRN PDKDRSYVQD IETATMFTHH QKTVIVDGGG GRTGPESPPG LVSFLGGIDL CDGRYDTQDH
401: PLFRTLGTTH SRDFHQPNFP GASISKGGPR EPWHDIHCRV EGPAAWDVLE NFEQRWKKQG KGDNMLVALN KAWAEREAAA GDAESWNVQV FRSIDGGAAA
501: GFPEGSADAP REAAALGLVS GKDHVIERSI QDAYIHAIRR ARDFVYIENQ YFLGSSYAWR RQNDGVTVED INALHLIPKE LSLKIVSKIE AGERFAVYVV
601: VPLWPEGVPE SGSVQAILDW QRRTMEMMYR DVTLAIRAKG LQDDPRDYLT FFCLGNREAP SPGEYVPPDH PDPNTDYERA QQARRFMIYV HAKTMIVDDE
701: YIIVGSANIN QRSMDGGRDT EIAMGAYQPG YLATRNRPAR GQVHGFRVSL WQEHLAQAAA AAAGGDLLRP SSLACVRRMN QVAKQHWDMF ASDAFRGDLP
801: GHLMAYPVSV LDDGSVVATT ESFPDTNNAK VLGNKSDILP PILTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.