Factsheet for TraesCS1B01G393300.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G379900.2	Wheat	cytosol	97.12	97.0
TraesCS1A01G373100.2	Wheat	plastid	93.76	93.76
HORVU1Hr1G082950.2	Barley	nucleus	91.84	90.64
HORVU1Hr1G082940.1	Barley	cytosol	86.55	86.66
HORVU1Hr1G082890.5	Barley	cytosol	84.75	85.37
KXG39222	Sorghum	cytosol, peroxisome, vacuole	79.11	77.99
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	79.47	77.25
Os03t0391400-01	Rice	plasma membrane	39.86	75.8
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	43.46	64.87
TraesCS3B01G149100.1	Wheat	unclear	61.58	63.18
TraesCS4B01G377600.1	Wheat	cytosol	59.42	60.29
TraesCS1B01G135200.1	Wheat	cytosol	58.7	59.78
TraesCS7B01G277900.1	Wheat	plastid	59.06	57.81
TraesCS1B01G050400.1	Wheat	cytosol	51.38	51.69
TraesCS7B01G468300.1	Wheat	cytosol	50.06	50.61
TraesCS7B01G468200.1	Wheat	cytosol	50.18	50.61
TraesCS5B01G222500.1	Wheat	cytosol	48.14	48.55
TraesCS1B01G195200.1	Wheat	cytosol	42.38	43.58
TraesCS5B01G525600.1	Wheat	cytosol	43.58	42.81
TraesCS5B01G336100.1	Wheat	cytosol	43.82	42.34
TraesCS5B01G200600.1	Wheat	cytosol	42.74	42.13
TraesCS1B01G382600.1	Wheat	mitochondrion	41.78	42.03
TraesCS4B01G352300.1	Wheat	cytosol	40.94	39.79
TraesCS6B01G096200.1	Wheat	cytosol	38.3	36.88
TraesCS1B01G242500.1	Wheat	cytosol, nucleus, peroxisome	22.69	16.71

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0046470	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF73	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF56024	EnsemblPlantsGene:TraesCS1B01G393300	EnsemblPlants:TraesCS1B01G393300.3	TIGR:cd04015	SEG:seg

Description

No Description!

Coordinates

chr1B:+:626152732..626155465

Molecular Weight (calculated)

92086.1 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.368

Length

833 amino acids

Sequence
(BLAST)

001: MAQMLLHGVV DAKILEADLS VTSDGQLRPT RKTVMKKRVF SWIKKLSFCN NSQRNARMQQ LENAIGLGGT AGKLYATVDI DKARVGRTRM VSPTNAPAWN
101: ESFHVYCAHD ASHIIFTVKA DNTVGATLIG RAYLPTGGAV LAGQRVDQWL PICDDKRRPL DGGDRIHVQL RFTDVADDPA ARWGAGVGDA AYPGVPRTFF
201: AQRRGCRVRL YQDAHISDGF AQRVHVTLAG GKPYQPRRCW EDVFEAITNA RRMVYIAGWS VNTDVALVRD PRKPSSGTLG ELLKKKAAEG VRVLMLVWDD
301: RTSLGLGPIR RDGLMATHDE DTATYFRGTG VRCILCPRNP DQGRSYVQDV ETAAMFTHHQ KTVIVDSSGN AAANAPPGLV SFLGGIDLCD GRYDTQEHPL
401: FRTLGTTHRD DFHQPNFPGA SINKGGPREP WHDIHCRVEG PAAWDVLDNF EQRWRKQGDG DNHLVTLDRG WAAREAVQDA ESWNVQVFRS IDGGAAAGFP
501: EKPEEAALIG LETGKDHVIE RSIQDAYIHA IRRARDFIYI ENQYFLGSSY AWRRDDGVTV EDINALHLIP KELSLKIVSK IEAGERFAVY VVVPMWPEGV
601: PESGSVQAIL DWQRRTMEMM YKDVALAIQA KGIQASPTDY LTFFCLGNRE APGPGEYVPP ERPDPDTDYD RAQQARRFMI YVHAKTMIVD DEYVIVGSAN
701: INQRSMDGGR DSEIAMGAYQ PGYLASTNRP ARGQVHGLRL ALWQEHLGQA AGAADLLQPS SLACVRGVNQ AAQQNWDMFA SDAPQGDLPG HLLAYPIGVS
801: EGGELLETTA FFPDTKARVL GNKSTYLPPI LTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.