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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g061850.2.1 Tomato cytosol 69.15 16.35
Solyc02g083340.2.1 Tomato nucleus 64.18 14.9
Solyc01g103910.1.1 Tomato cytosol 46.27 13.34
Solyc04g082000.2.1 Tomato cytosol 53.73 12.87
Solyc10g024370.1.1 Tomato cytosol 46.77 11.2
Solyc08g066800.2.1 Tomato plastid 39.8 9.91
Solyc06g068090.2.1 Tomato plastid 37.81 9.39
Solyc08g080130.2.1 Tomato nucleus 38.81 9.22
Solyc08g066790.2.1 Tomato plastid 36.82 9.17
Solyc01g091910.2.1 Tomato plastid 39.8 8.94
Solyc03g116620.2.1 Tomato plastid 35.82 8.88
Solyc12g011170.1.1 Tomato cytosol 36.32 8.61
Solyc10g017650.1.1 Tomato cytosol 41.79 7.51
Solyc08g045740.1.1 Tomato cytosol 6.47 4.76
Solyc01g065720.2.1 Tomato cytosol 19.4 3.53
Solyc01g100020.2.1 Tomato cytosol, nucleus, peroxisome 17.91 3.42
Solyc01g103900.2.1 Tomato cytosol 0.5 0.61
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 0.5 0.25
Protein Annotations
EnsemblPlants:Solyc04g051140.1.1EnsemblPlantsGene:Solyc04g051140.1InterPro:PLipase_D_famKEGG:00564+3.1.4.4KEGG:00565+3.1.4.4PANTHER:PTHR18896
PANTHER:PTHR18896:SF86SUPFAM:SSF56024UniParc:UPI0002766F9AUniProt:K4BS76MapMan:35.1:
Description
No Description!
Coordinates
chr4:-:49725757..49726985
Molecular Weight (calculated)
23419.2 Da
IEP (calculated)
8.004
GRAVY (calculated)
-0.427
Length
201 amino acids
Sequence
(BLAST)
001: MDPETQPPWE ICNLSKVNKL LHGTTNQRVK TILSPTKCPT QELVESNLHS YVYIYILDRG EFEKNSLYKH GIASDPQYLG VRNSYFPVRK GSLVKLYQDA
101: HVSNNVMFPK IKLENDTNFE HNKCWEDICY AITEAHHLIY IVGWSVFHKI KLIREPTRPL PRGGDLTLDE LLKYKSQEGV RVLLLLWDDK TSHDKFFITT
201: V
Best Arabidopsis Sequence Match ( AT4G35790.1 )
(BLAST)
001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC
401: DGRYDTPEHR ILHDLDTVFK DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH WQDDALIRIG RISWILSPVF
501: KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601: RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN
701: GSVVSDSYNF QRFMIYVHAK GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA EHLGKTGDEF VEPSDLECLK
801: KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP LPDYETFPDV GGKIIGAHSM ALPDTLTT
Arabidopsis Description
PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.