Factsheet for GSMUA_AchrUn_randomP17490_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P12720_001	Banana	cytosol	84.75	28.96
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	60.45	28.53
KRH16768	Soybean	endoplasmic reticulum, plastid	80.79	28.09
Solyc11g009080.1.1	Tomato	plastid	79.66	27.59
PGSC0003DMT400041816	Potato	plastid	77.4	27.4
PGSC0003DMT400041818	Potato	plastid	79.1	27.4
VIT_00s0391g00070.t01	Wine grape	plastid	81.36	27.07
KRH72380	Soybean	endoplasmic reticulum	80.79	26.88
GSMUA_Achr10P...	Banana	mitochondrion	56.5	26.45
Bra011819.1-P	Field mustard	plastid	76.84	26.25
KRH53034	Soybean	plastid	75.71	25.97
GSMUA_Achr1P21510_001	Banana	plastid	78.53	25.84
AT4G39980.1	Thale cress	plastid	75.71	25.52
CDY69114	Canola	plastid	61.58	22.52
CDX69370	Canola	plastid	60.45	22.15
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	5.08	2.39

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:50.2.5	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009611	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:GSMUA_AchrUn_randomG17490_001	EnsemblPlants:GSMUA_AchrUn_randomP17490_001	EnsemblPlants:GSMUA_AchrUn_randomT17490_001	InterPro:IPR013785	UniProt:M0UA08
PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	SUPFAM:SSF51569	UniParc:UPI000295350F	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17490_001]

Coordinates

chrchrUn_random:-:82994309..82995278

Molecular Weight (calculated)

20072.8 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.560

Length

177 amino acids

Sequence
(BLAST)

001: MFAGEARNLD ERLADAALGK AFLLQGSDCA ESFKEFNSIN IRDTFRILLQ MSVALLFCGQ MPVIKVGRMA GQFSKPRSEP FEEKNGLKLP SYRRDNINGD
101: AFDEKSRIPN PQRMIRAYCQ AAEPPPRHSE QGDRYQELAH RVDEALGFMA AAGLTMDHPI MTTTEFWTSH ECHHDNH

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.