Factsheet for GSMUA_Achr4P28940_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0564400-01	Rice	plastid	82.71	61.22
EER91915	Sorghum	plastid	80.59	60.72
TraesCS1D01G218300.1	Wheat	plastid	82.45	60.43
TraesCS1B01G229700.1	Wheat	plastid	82.45	60.43
HORVU1Hr1G055370.1	Barley	plastid	82.18	60.23
KRH10562	Soybean	nucleus, plastid	78.99	60.0
HORVU0Hr1G000490.1	Barley	cytosol	82.18	58.86
GSMUA_AchrUn_...	Banana	cytosol	2.39	5.08
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	4.52	4.53
GSMUA_Achr10P...	Banana	mitochondrion	3.99	3.97
Bra016381.1-P	Field mustard	plastid	4.26	3.09
CDY68560	Canola	plastid	4.26	3.09
CDY41485	Canola	plastid	4.26	3.09
CDY21361	Canola	plastid	4.26	3.09
CDY04818	Canola	plastid	4.26	3.09
Bra031389.1-P	Field mustard	plastid	4.26	3.09
AT1G22410.1	Thale cress	plastid	4.26	3.04
GSMUA_Achr7P12720_001	Banana	cytosol	3.99	2.9
CDX87459	Canola	plastid	3.99	2.9
CDX88433	Canola	plastid	3.99	2.88
GSMUA_Achr1P21510_001	Banana	plastid	3.99	2.79
Bra035024.1-P	Field mustard	cytosol	3.99	2.02
Zm00001d031139_P001	Maize	plastid	0.8	1.36

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr4G28940_001	EnsemblPlants:GSMUA_Achr4P28940_001
EnsemblPlants:GSMUA_Achr4T28940_001	InterPro:IPR013785	UniProt:M0ST06	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF14
SUPFAM:SSF51569	UniParc:UPI000295A713	:	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G28940_001]

Coordinates

chr4:-:27137228..27141488

Molecular Weight (calculated)

41966.1 Da

IEP (calculated)

7.679

GRAVY (calculated)

-0.399

Length

376 amino acids

Sequence
(BLAST)

001: MGVVLTFGGQ MPIIKVGRMA GQFAKPRSEP FETKDGVKLP SYQGDNINSD IFDEKSREPD PKRLLKAYSQ SAGTLNLLRA FATGGYASIQ RVTQWNLDFV
101: EHSEQGDRYM ELAQRVDDAI GFMVAAGLTA NHPIMATTEF WTSHECLHLP YEQALTREDS TSGQYYDCSA HMLWVGERTR QLDGAHVEFL RGIANPLGIK
201: VSDKMDPSEL VKLCEILNHH NKPGRLTIIT RMGAESMRVK LPHLIRAVRQ AGLIVTWVSD PMHGNTVKAP CGLKTRSFDA IRSELRAFFD VHEQEGSHPG
301: GVHLEMTGQN VTECIGGSKA VTYDDLSSRY HTHCDPRLNA SQSLELAFAI AERLRKRRIS SWGKRVFEQN PQAAVA

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.