CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0564400-01	Rice	plastid	82.77	81.3
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	60.72	80.59
TraesCS1B01G229700.1	Wheat	plastid	80.56	78.36
TraesCS1D01G218300.1	Wheat	plastid	80.36	78.17
HORVU1Hr1G055370.1	Barley	plastid	79.76	77.58
HORVU0Hr1G000490.1	Barley	cytosol	75.55	71.81
KRH10562	Soybean	nucleus, plastid	68.74	69.29
EES14335	Sorghum	plastid	14.43	14.17
Bra016381.1-P	Field mustard	plastid	13.63	13.15
CDY41485	Canola	plastid	13.63	13.15
CDY68560	Canola	plastid	13.63	13.15
CDX88433	Canola	plastid	13.63	13.05
CDY04818	Canola	plastid	13.43	12.93
EER94760	Sorghum	plastid	14.23	12.89
CDY21361	Canola	plastid	13.23	12.74
CDX87459	Canola	plastid	13.23	12.74
Bra031389.1-P	Field mustard	plastid	13.23	12.74
AT1G22410.1	Thale cress	plastid	13.23	12.52
EER99720	Sorghum	plastid	13.03	12.04
Bra035024.1-P	Field mustard	cytosol	12.63	8.49
Zm00001d031139_P001	Maize	plastid	3.21	7.27

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EntrezGene:8055629	InterPro:Aldolase_TIM	UniProt:C5WRG8
InterPro:DAHP_synth_2	EnsemblPlants:EER91915	ProteinID:EER91915	ProteinID:EER91915.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337
PANTHER:PTHR21337:SF17	MetaCyc:PWY-6164	EnsemblPlantsGene:SORBI_3001G294500	SUPFAM:SSF51569	unigene:Sbi.5615	TIGRFAMs:TIGR01358
UniParc:UPI0001A82440	RefSeq:XP_002464917.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:57313755..57317353

Molecular Weight (calculated)

55514.5 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.372

Length

499 amino acids

Sequence
(BLAST)

001: MAPLATAPPP TPHAPRSLVP RVRPRRGLTA VRAASQGRTT DGWTPGSWRA RPARQIPEYP DTAALEATER TLAEFPPLVF TGEVRKLEER LGEAAMGRAF
101: LLQGGDCAES FREFNAQKIR DTFRLILQMA VVLTFGGQMP TIKVGRMGGQ FAKPRSNPTE TVDGVTLPSY RGDIINDQAF DEKSRVPDPE RLIRAYTQSA
201: STLNLLRAFA HGGFADLQRV TQWNLDFLRH STQGDRYLEL SQRVHEAIGF MVAAGLTPQH PIMTTAELWT SHESLHLPYE QALTREDSIS GRYYDCSAHM
301: LWVGERTRQL DGAHVEFLRG ISNPLGIKVS DKLDPSELVK LCETLNPHNK PGRLTIITRM GAENMRVKLP QMIRAVRQAG MIVTWVSDPM HGNTISAPCG
401: LKTRSFDSIM AELRAFFDVH GLEGSYPGGV HLEMTGQNVT ECIGGSKAVT FDDLSARYHT HCDPRLNASQ SLELAFAIAD RLRNKRDKTW HNLTSRVVA

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.