CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0484500-01	Rice	plastid	89.17	89.7
Bra031389.1-P	Field mustard	plastid	78.15	76.64
CDY21361	Canola	plastid	78.15	76.64
CDY04818	Canola	plastid	78.15	76.64
CDX87459	Canola	plastid	77.56	76.06
Bra016381.1-P	Field mustard	plastid	77.17	75.82
CDY41485	Canola	plastid	77.17	75.82
CDX88433	Canola	plastid	77.76	75.82
Zm00001d052797_P002	Maize	extracellular	75.39	75.69
CDY68560	Canola	plastid	76.97	75.63
AT1G22410.1	Thale cress	plastid	77.76	74.95
EER94760	Sorghum	plastid	79.53	73.32
GSMUA_Achr1P21510_001	Banana	plastid	77.56	73.23
EER99720	Sorghum	plastid	76.18	71.67
Solyc01g105390.2.1	Tomato	cytosol	25.39	67.89
Bra035024.1-P	Field mustard	cytosol	77.17	52.83
EER91915	Sorghum	plastid	14.17	14.43

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EntrezGene:8055379	InterPro:Aldolase_TIM	UniProt:C5YJQ4
InterPro:DAHP_synth_2	EnsemblPlants:EES14335	ProteinID:EES14335	ProteinID:EES14335.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337
PANTHER:PTHR21337:SF4	MetaCyc:PWY-6164	EnsemblPlantsGene:SORBI_3007G225700	SUPFAM:SSF51569	unigene:Sbi.7283	TIGRFAMs:TIGR01358
UniParc:UPI0001A87812	RefSeq:XP_002444840.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:65308770..65311816

Molecular Weight (calculated)

56343.5 Da

IEP (calculated)

8.098

GRAVY (calculated)

-0.351

Length

508 amino acids

Sequence
(BLAST)

001: MPLAPSTPAL PPNPALPSPC RGQGRGRPGR GALLRARAVR AAPRPPSQWS VGSWRGRPAL QQPEYPDKAD LNEVLRTVEA FPPIVFAGEA RTLEERLAEA
101: AVGRAFLLQG GDCAESFKEF NANNIRDTFR VLLQMSVVLM FGGQMPVVKV GRMAGQFAKP RSDGFEERDG VKLPSYRGDN INGDAFDEKS RLPDPHRMIS
201: AYSQSAATLN LLRAFATGGY AAMQRVTQWN LDFTEHSEQG DRYMELAHRV DEALGFMSAA GLTLDHPIMT TTEFWTSHEC LLLPYEQALT REDSTSGLYY
301: DCSAHFLWVG ERTRQLDGAH VEFLRGIANP LGIKVSDKMD PAELVRLIDI LNPENRAGRI TIIARMGPEN MRVKLPHLIR AVRGAGQIVT WVTDPMHGNT
401: MKAPCGLKTR SFDRILAEVR AFFDVHEQEG SHPGGVHLEM TGQNVTECIG GSRTVTFDDL GSRYHTHCDP RLNASQSLEM AFIIAERLRK RRIASSPLYT
501: NQLGSIRL

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.