Factsheet for Os08t0484500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14335	Sorghum	plastid	89.7	89.17
Bra031389.1-P	Field mustard	plastid	79.21	77.22
CDY04818	Canola	plastid	79.21	77.22
CDY21361	Canola	plastid	79.21	77.22
CDX87459	Canola	plastid	78.42	76.45
Bra016381.1-P	Field mustard	plastid	78.02	76.21
CDY41485	Canola	plastid	78.02	76.21
CDX88433	Canola	plastid	78.42	76.01
CDY68560	Canola	plastid	77.62	75.82
AT1G22410.1	Thale cress	plastid	78.42	75.14
GSMUA_Achr1P21510_001	Banana	plastid	79.21	74.35
Os07t0622200-01	Rice	plastid	78.02	73.37
Os03t0389700-01	Rice	plastid	78.61	71.53
Zm00001d052797_P002	Maize	extracellular	71.09	70.95
Solyc01g105390.2.1	Tomato	cytosol	25.74	68.42
Bra035024.1-P	Field mustard	cytosol	78.61	53.5
Os10t0564400-01	Rice	plastid	15.05	14.96
Os08t0484400-01	Rice	mitochondrion, plastid	13.07	8.13

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EntrezGene:4345872	EMBL:AK070359	InterPro:Aldolase_TIM
ProteinID:BAD10708.1	ProteinID:BAF23996.1	ProteinID:BAT05957.1	InterPro:DAHP_synth_2	ProteinID:EAZ43124.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	EnsemblPlantsGene:Os08g0484500
EnsemblPlants:Os08t0484500-01	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF4	UniProt:Q6YTT3	SUPFAM:SSF51569
TIGRFAMs:TIGR01358	UniParc:UPI000023B147	RefSeq:XP_015650153.1	SEG:seg	:	:

Description

Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1). (Os08t0484500-01);Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 2. (Os08t0484500-02)

Coordinates

chr8:-:23934860..23938837

Molecular Weight (calculated)

56437.8 Da

IEP (calculated)

8.402

GRAVY (calculated)

-0.362

Length

505 amino acids

Sequence
(BLAST)

001: MPLAPCPSPP LPSSPWPARA PRRGGLLRAR AVRAAPRPPS KWSLGSWRSL TALQQPEYPD KAELDEVLRT VEAFPPIVFA GEARKLEERL AEAAVGRAFL
101: LQGGDCAESF KEFNANNIRD TFRVLLQMSV VLMFGGQMPI IKVGRMAGQF AKPRSDGFEE RDGVKLPSYR GDNINGDSFD EKSRLPDPHR MIRAYSQSAA
201: TLNLLRAFAT GGYAAMQRVT QWNLDFTEHS EQGDRYMELA HRVDEALGFM AAAGLTMDHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG LYYDCSAHFL
301: WVGERTRQLD CAHVEFLRGI ANPLGIKVSD KMDPKELVKL IDILNPQNKP GRITIITRMG PENMRVKLPH LIRAVRGAGQ IVTWVTDPMH GNTMKAPCGL
401: KTRSFDRILA EVRAFFDVHE QEGSHPGGVH LEMTGQNVTE CIGGSRTVTF DDLGSRYHTH CDPRLNASQS LELAFIIAER LRKRRIASWQ LNKNSHLGNI
501: PSLGL

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.