CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016381.1-P	Field mustard	plastid	100.0	100.0
CDY68560	Canola	plastid	98.07	98.07
CDY21361	Canola	plastid	94.0	93.82
CDY04818	Canola	plastid	93.42	93.24
AT1G22410.1	Thale cress	plastid	91.88	90.13
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	64.41	88.8
CDX87459	Canola	plastid	85.88	85.71
CDX88433	Canola	plastid	86.27	85.6
Zm00001d030369_P001	Maize	mitochondrion	17.41	83.33
Os08t0484500-01	Rice	plastid	76.21	78.02
GSMUA_Achr7P12720_001	Banana	cytosol	77.95	77.8
EES14335	Sorghum	plastid	75.82	77.17
HORVU2Hr1G029870.4	Barley	plastid	75.05	76.98
Os07t0622200-01	Rice	plastid	78.53	75.61
CDX68985	Canola	plastid	73.31	74.61
GSMUA_Achr1P21510_001	Banana	plastid	77.56	74.54
CDX69370	Canola	plastid	69.63	74.53
CDX75362	Canola	plastid	72.73	74.02
TraesCS2A01G163600.1	Wheat	golgi, plastid	76.4	73.97
CDY69114	Canola	plastid	69.25	73.97
TraesCS2D01G170400.1	Wheat	plastid	76.4	73.83
TraesCS2B01G189300.1	Wheat	plastid	76.6	73.74
Zm00001d022181_P004	Maize	plastid	76.6	73.61
EER99720	Sorghum	plastid	76.79	73.52
Zm00001d006900_P004	Maize	plastid	75.63	72.81
EER94760	Sorghum	plastid	77.56	72.78
Os03t0389700-01	Rice	plastid	76.6	71.35
Zm00001d044716_P001	Maize	cytosol	27.85	68.57
Zm00001d013618_P002	Maize	plastid	47.78	68.42
Solyc01g105390.2.1	Tomato	cytosol	24.56	66.84
Zm00001d029391_P002	Maize	plastid	70.21	66.0
Zm00001d052797_P002	Maize	extracellular	63.06	64.43
Zm00001d020059_P001	Maize	cytosol	28.63	61.92
Zm00001d037739_P001	Maize	plastid	26.69	56.79
Zm00001d017655_P001	Maize	plastid	20.12	39.85
KRH10562	Soybean	nucleus, plastid	15.09	15.76
Os10t0564400-01	Rice	plastid	14.51	14.76
TraesCS1D01G218300.1	Wheat	plastid	14.31	14.43
TraesCS1B01G229700.1	Wheat	plastid	13.93	14.04
EER91915	Sorghum	plastid	13.15	13.63
HORVU1Hr1G055370.1	Barley	plastid	13.35	13.45
Zm00001d031139_P001	Maize	plastid	5.61	13.18
HORVU0Hr1G000490.1	Barley	cytosol	11.61	11.43
Os08t0484400-01	Rice	mitochondrion, plastid	13.35	8.5
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	3.09	4.26

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078HSA7	UniProt:A0A078HSA7	InterPro:Aldolase_TIM
EnsemblPlants:CDY41485	ProteinID:CDY41485	ProteinID:CDY41485.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00073094001	InterPro:IPR013785	PFAM:PF01474
PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164	SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniPathway:UPA00053
UniParc:UPI00025465CD	:	:	:	:	:

Description

BnaA08g20870DPhospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078HSA7]

Coordinates

chrLK032498:-:224099..226486

Molecular Weight (calculated)

57732.1 Da

IEP (calculated)

8.090

GRAVY (calculated)

-0.357

Length

517 amino acids

Sequence
(BLAST)

001: MALMNGSMNL SSIKTTIFNH RQTSFSSAVP RTTSLRISAV QTDPKPPTSS TVTKSVEVNV SKSKWTPESW KKQKALQQPE YPDLAELEAV LDTIESFPPI
101: VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEERNGVKLP SYRGDNINGD
201: AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELAHRVDEAL GFMHAAGLTL DHPIMQTTEF WTSHECLLLP
301: YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPNEL VKLIEILNAD NKPGRITIIT RMGAENMRVK LPNLIRAVRR
401: AGQIVTWVSD PMHGNTIKAP CGLKTRPFDS IMAEVKAFFD VHEQEGSHPG GVHLEMTGQN VTECIGGSRT VTFDDLSSRY HTHCDPRLNA SQSLELSFII
501: AERLRKRRIK SQQAFSV

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.