Factsheet for Zm00001d022181_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99720	Sorghum	plastid	97.03	96.67
Zm00001d006900_P004	Maize	plastid	93.68	93.85
Zm00001d030369_P001	Maize	mitochondrion	18.59	92.59
Os07t0622200-01	Rice	plastid	89.03	89.2
Zm00001d037739_P001	Maize	plastid	40.15	88.89
TraesCS2D01G170400.1	Wheat	plastid	85.87	86.36
TraesCS2A01G163600.1	Wheat	golgi, plastid	85.13	85.77
TraesCS2B01G189300.1	Wheat	plastid	85.32	85.47
HORVU2Hr1G029870.4	Barley	plastid	78.81	84.13
Zm00001d044716_P001	Maize	cytosol	30.3	77.62
Zm00001d013618_P002	Maize	plastid	52.04	77.56
CDX87459	Canola	plastid	73.98	76.83
Bra016381.1-P	Field mustard	plastid	73.61	76.6
CDY41485	Canola	plastid	73.61	76.6
CDY68560	Canola	plastid	73.61	76.6
CDY04818	Canola	plastid	73.61	76.45
Bra031389.1-P	Field mustard	plastid	73.61	76.45
CDY21361	Canola	plastid	73.61	76.45
CDX88433	Canola	plastid	73.79	76.2
AT1G22410.1	Thale cress	plastid	74.16	75.71
Zm00001d029391_P002	Maize	plastid	73.42	71.82
Zm00001d020059_P001	Maize	cytosol	31.78	71.55
Zm00001d017655_P001	Maize	plastid	32.16	66.28
Solyc01g105390.2.1	Tomato	cytosol	22.86	64.74
Zm00001d052797_P002	Maize	extracellular	58.92	62.65
Bra035024.1-P	Field mustard	cytosol	73.61	53.37
Zm00001d031139_P001	Maize	plastid	5.39	13.18

Protein Annotations

KEGG:00400+2.5.1.54	EntrezGene:100284499	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	UniProt:B6TUB8
InterPro:DAHP_synth_2	EMBL:EU968583	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	InterPro:IPR013785	ProteinID:ONM59760.1	ProteinID:ONM59766.1	PFAM:PF01474	PANTHER:PTHR21337
PANTHER:PTHR21337:SF18	SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniParc:UPI000182E39A	EnsemblPlantsGene:Zm00001d022181	EnsemblPlants:Zm00001d022181_P004
EnsemblPlants:Zm00001d022181_T004	SEG:seg	:	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1

Coordinates

chr7:-:172074891..172079102

Molecular Weight (calculated)

59007.7 Da

IEP (calculated)

8.384

GRAVY (calculated)

-0.278

Length

538 amino acids

Sequence
(BLAST)

001: MALATNSAAA AAAAVSGGAA SQPHRAATFL PLKRRTISAI HAADPSKNNG PAVPAAAAAK SSASAVATPE KNPAAPVKWA VDSWKSKKAL QLPEYPNQEE
101: LDTVLKTIET FPPVVFAGEA RHLEERMAEA AMGRAFILQG GDCAESFKEF HANNIRDTFR ILLQMGAVLM FGGQVPVVKV GRMAGQFAKP RSEPLEERDG
201: VKLPSYRGDN VNGDDFTEKS RVPDPQRMIR AYSQSVATLN LLRALATGGY AAMQRVTQWN LDFMDHSEQG DRYRELAHRV DEALGFMTAA GLTVDHPIMT
301: TTDFWTSHEC LLLPYEQSLT RKDSTSGLFY DCSAHMLWVG ERTRQLDGAH VEFLRGVANP LGIKVSDKMN PSDLVKLIEI LNPSNKPGRI TIITRMGAEN
401: MRVKLPHLIR AVRNAGLIVT WITDPMHGNT IKAPCGLKTR PFDSILAEVR AFFDVHDQEG SHPGGIHLEM TGQNVTECIG GSRTVTFDDL SDRYHTHCDP
501: RLNASQSLEL AFIIAERLRK RRMRSGLNNS LPLPPLAF

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.