CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87459	Canola	plastid	96.74	97.3
CDY04818	Canola	plastid	87.52	88.03
CDY21361	Canola	plastid	87.52	88.03
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	62.96	87.47
CDY41485	Canola	plastid	85.6	86.27
CDY68560	Canola	plastid	85.6	86.27
Zm00001d030369_P001	Maize	mitochondrion	17.08	82.41
Os08t0484500-01	Rice	plastid	76.01	78.42
HORVU2Hr1G029870.4	Barley	plastid	75.82	78.37
EES14335	Sorghum	plastid	75.82	77.76
GSMUA_Achr7P12720_001	Banana	cytosol	76.39	76.83
Os07t0622200-01	Rice	plastid	78.12	75.79
CDX75362	Canola	plastid	73.9	75.79
CDY69114	Canola	plastid	70.25	75.62
CDX69370	Canola	plastid	69.87	75.36
CDX68985	Canola	plastid	73.32	75.2
TraesCS2A01G163600.1	Wheat	golgi, plastid	76.78	74.91
TraesCS2B01G189300.1	Wheat	plastid	77.16	74.86
TraesCS2D01G170400.1	Wheat	plastid	76.78	74.77
EER99720	Sorghum	plastid	76.58	73.89
Zm00001d022181_P004	Maize	plastid	76.2	73.79
GSMUA_Achr1P21510_001	Banana	plastid	75.62	73.23
Zm00001d006900_P004	Maize	plastid	74.47	72.25
Os03t0389700-01	Rice	plastid	76.01	71.35
EER94760	Sorghum	plastid	75.24	71.14
Zm00001d044716_P001	Maize	cytosol	28.41	70.48
Zm00001d013618_P002	Maize	plastid	47.98	69.25
Solyc01g105390.2.1	Tomato	cytosol	24.76	67.89
Zm00001d029391_P002	Maize	plastid	69.87	66.18
Zm00001d052797_P002	Maize	extracellular	62.38	64.23
Bra035024.1-P	Field mustard	cytosol	89.25	62.67
Zm00001d020059_P001	Maize	cytosol	28.6	62.34
Zm00001d037739_P001	Maize	plastid	25.72	55.14
Zm00001d017655_P001	Maize	plastid	19.19	38.31
KRH10562	Soybean	nucleus, plastid	14.78	15.56
Zm00001d031139_P001	Maize	plastid	6.33	15.0
Os10t0564400-01	Rice	plastid	14.01	14.37
TraesCS1D01G218300.1	Wheat	plastid	13.82	14.04
TraesCS1B01G229700.1	Wheat	plastid	13.44	13.65
EER91915	Sorghum	plastid	13.05	13.63
HORVU1Hr1G055370.1	Barley	plastid	13.05	13.26
HORVU0Hr1G000490.1	Barley	cytosol	11.13	11.05
Os08t0484400-01	Rice	mitochondrion, plastid	12.86	8.25
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	2.88	3.99

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078DMG8	InterPro:Aldolase_TIM	EnsemblPlants:CDX88433
ProteinID:CDX88433	ProteinID:CDX88433.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00147975001	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniPathway:UPA00053	UniParc:UPI0004EDD652	:	:

Description

BnaC06g38770D

Coordinates

chrLK031855:+:999003..1002243

Molecular Weight (calculated)

57670.1 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.324

Length

521 amino acids

Sequence
(BLAST)

001: MALMNGGLNL PSTKPAIRHR QPVSSSASRP AFLRISAVID PKNESTTSKT PAAATVKKPV GVHLNKSKWS PETWKAKTAL QQPEYPDQTE LDSVLKTIEA
101: FPPIVFAGEA RLLEERLGQA AMGEAFLLQG GDCAESFKEF NANNIRDTFR IILQMGAVLM FGGQVPVIKV GRMAGQFAKP RSDSFEERDG VKLPSYRGDN
201: INGDAFDAKS RIPDPQRMVS AYCQSAATLN LLRAFATGGY AAMQRVTQWN LDFAEHSEQG DRYRELANRV DEALGFMHAA GLTLDHPIMQ TTDFWTSHEC
301: LLLPYEQSLT RLDSTSGLYY DCSAHMVWVG ERTRQLDGAH VEFLRGIANP LGIKVSNKMD PAELVKLIEI LNPENKPGRI TIITRMGAEN MRVKLPHLIR
401: AVRGAGQIVT WVSDPMHGNT IKAPCGLKTR PFDSILAEVR AFFDVHDQEG SHPGGIHLEM TGQNVTECIG GSRTVTFDDL GSRYHTHCDP RLNASQSLEL
501: SFVIAERLRK RRIKSQQAFA V

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.