Factsheet for GSMUA_Achr7P12720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	68.92	95.2
GSMUA_Achr10P...	Banana	mitochondrion	65.64	89.95
GSMUA_AchrUn_...	Banana	cytosol	28.96	84.75
Bra031389.1-P	Field mustard	plastid	78.38	78.38
CDY04818	Canola	plastid	78.38	78.38
CDY21361	Canola	plastid	78.38	78.38
GSMUA_Achr1P21510_001	Banana	plastid	81.08	78.07
Bra016381.1-P	Field mustard	plastid	77.8	77.95
CDY41485	Canola	plastid	77.8	77.95
CDY68560	Canola	plastid	77.41	77.56
CDX87459	Canola	plastid	76.64	76.64
AT1G22410.1	Thale cress	plastid	77.8	76.47
CDX88433	Canola	plastid	76.83	76.39
Solyc01g105390.2.1	Tomato	cytosol	25.48	69.47
Bra035024.1-P	Field mustard	cytosol	76.06	53.1
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	2.9	3.99

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr7G12720_001	EnsemblPlants:GSMUA_Achr7P12720_001
EnsemblPlants:GSMUA_Achr7T12720_001	InterPro:IPR013785	UniProt:M0TH10	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF18
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniParc:UPI000295E12B	SEG:seg	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G12720_001]

Coordinates

chr7:+:10226300..10233597

Molecular Weight (calculated)

57897.5 Da

IEP (calculated)

7.820

GRAVY (calculated)

-0.320

Length

518 amino acids

Sequence
(BLAST)

001: MMYSFIIFLL ENRKNYNLHP SLLIKDYLHC DSCVGSHRSS TSGPITTITT PPTKPGKWSV DSWKAKKAIQ LPEYPDKAEL ESVLRTIENF PPIVFAGEAR
101: HLEERLADAA LGKAFLLQGG DCAESFKEFN ANNIRDTFRI LLQMGAVLMF GGQLPVVKVG RMAGQFAKPR SEPFEEKDGV KLPSYRGDNI NGDAFNEKSR
201: VPDPQRMIRA YCQAAATLNL LRAFATGGYA AMQRVTQWNL DFTEHSEQGD RYQELAHRVD EALGFMAAAG LTMDHPIMTT TEFWTSHECL LLPYEQSLTR
301: EDSTSGLYYD CSAHFLWVGE RTRQLDGAHV EFLRGIANPL GIKVSDKMDP KELVKLVEIL NPQNKPGRIT VIARMGADKM RVKLPHLIRA VRGAGQIVTW
401: VSDPMHGNTI KAPCGLKTRP FDSILAEVRA FFDVHEQEGS HPGGVHLEMT GQNVTECIGG SRNVTFDDLS SRYHTHCDPR LNASQSLELA FIIAERLRKR
501: RIASRPLNQV SSLPSLGL

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.