Factsheet for Solyc01g105390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105420.2.1	Tomato	plastid	74.74	88.2
Zm00001d044716_P001	Maize	cytosol	61.58	55.71
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	69.47	35.2
Zm00001d013618_P002	Maize	plastid	63.16	33.24
Os08t0484500-01	Rice	plastid	68.42	25.74
GSMUA_Achr7P12720_001	Banana	cytosol	69.47	25.48
EES14335	Sorghum	plastid	67.89	25.39
Solyc11g009080.1.1	Tomato	plastid	67.37	25.05
CDX87459	Canola	plastid	67.89	24.9
CDX88433	Canola	plastid	67.89	24.76
Bra016381.1-P	Field mustard	plastid	66.84	24.56
CDY68560	Canola	plastid	66.84	24.56
CDY41485	Canola	plastid	66.84	24.56
CDY21361	Canola	plastid	66.84	24.52
CDY04818	Canola	plastid	66.84	24.52
Bra031389.1-P	Field mustard	plastid	66.84	24.52
HORVU2Hr1G029870.4	Barley	plastid	64.74	24.4
Solyc04g074480.2.1	Tomato	plastid	68.95	24.21
AT1G22410.1	Thale cress	plastid	66.32	23.91
GSMUA_Achr1P21510_001	Banana	plastid	67.37	23.79
Zm00001d006900_P004	Maize	plastid	66.32	23.46
TraesCS2A01G163600.1	Wheat	golgi, plastid	64.74	23.03
TraesCS2D01G170400.1	Wheat	plastid	64.74	22.99
TraesCS2B01G189300.1	Wheat	plastid	64.74	22.91
EER94760	Sorghum	plastid	66.32	22.87
Zm00001d022181_P004	Maize	plastid	64.74	22.86
EER99720	Sorghum	plastid	64.74	22.78
Os07t0622200-01	Rice	plastid	64.21	22.72
Os03t0389700-01	Rice	plastid	66.32	22.7
Zm00001d029391_P002	Maize	plastid	64.21	22.18
Bra035024.1-P	Field mustard	cytosol	67.89	17.39
Zm00001d052797_P002	Maize	extracellular	43.16	16.21
Zm00001d020059_P001	Maize	cytosol	17.37	13.81
Zm00001d017655_P001	Maize	plastid	6.84	4.98
Zm00001d030369_P001	Maize	mitochondrion	1.58	2.78
Zm00001d037739_P001	Maize	plastid	1.58	1.23

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	UniProt:K4B2A9
PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	SUPFAM:SSF51569	EnsemblPlantsGene:Solyc01g105390.2	EnsemblPlants:Solyc01g105390.2.1
UniParc:UPI0002768F80	:	:	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:K4B2A9]

Coordinates

chr1:-:93568738..93569901

Molecular Weight (calculated)

21279.8 Da

IEP (calculated)

10.079

GRAVY (calculated)

-0.316

Length

190 amino acids

Sequence
(BLAST)

001: MKGKLEIINS KWFLNRVSHK MDPNELVKLI DILNPQNRPG RITVIARMGA DNMRVKLPHL IRAIRGAGQI VTWVSDPMHG NTTKAPCGLK TRSFDSIRAE
101: VRAFFDVHDQ EGSYPGGVHL EMTGQNVTEC VGGSQTITYN DLSSRYHTHC DPRLNASQAL NLPLLLRSAS GKEDWVLSLG FRKPILLPFH

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.