Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
plastid: 22908117 nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400079161 | Potato | plastid | 97.6 | 97.6 |
Solyc01g105420.2.1 | Tomato | plastid | 25.51 | 85.71 |
KRH16768 | Soybean | endoplasmic reticulum, plastid | 75.79 | 80.55 |
KRH72380 | Soybean | endoplasmic reticulum | 78.93 | 80.26 |
VIT_18s0001g06250.t01 | Wine grape | plastid | 80.96 | 79.93 |
Solyc11g009080.1.1 | Tomato | plastid | 73.2 | 77.5 |
KRH53034 | Soybean | plastid | 71.53 | 75.0 |
Solyc01g105390.2.1 | Tomato | cytosol | 24.21 | 68.95 |
Protein Annotations
KEGG:00400+2.5.1.54 | Gene3D:3.20.20.70 | MapMan:4.1.5.1.1 | InterPro:Aldolase_TIM | InterPro:DAHP_synth_2 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0003849 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009073 | GO:GO:0009423 |
GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | InterPro:IPR013785 |
UniProt:K4BTY6 | PFAM:PF01474 | PANTHER:PTHR21337 | PANTHER:PTHR21337:SF16 | SUPFAM:SSF51569 | EnsemblPlantsGene:Solyc04g074480.2 |
EnsemblPlants:Solyc04g074480.2.1 | TIGRFAMs:TIGR01358 | UniParc:UPI0002765641 | SEG:seg | : | : |
Description
Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:K4BTY6]
Coordinates
chr4:+:60468402..60472033
Molecular Weight (calculated)
59926.4 Da
IEP (calculated)
8.998
GRAVY (calculated)
-0.404
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSTNTTTN SLLSNKSLLQ NQPLLSSPSK NAFFSNKSTK TVRFVQPIAA VHSSDSNKNP IVSDKPSKSS PPAATATTAP APAVTKTEWA VDSWKSKKAL
101: QLPEYPDQEE LRSVLKTIDE FPPIVFAGEA RSLEERLGEA AMGRAFLLQG GDCAESFKEF NANNIRDTFR ILLQMGAVLM FGGQMPVIKV GRMAGQFAKP
201: RSDSFEEKDG VKLPSYRGDN VNGDAFDVKS RTPDPQRLIR AYCQSAATLN LLRAFATGGY AAMQRINQWN LDFTEHSEQG DRYRELASRV DEALGFMTAA
301: GLTMDHPIMK TTEFWTSHEC LLLPYEQSLT RRDSTSGLHY DCSAHFLWVG ERTRQLDGAH VEFLRGIANP LGIKVSDKMD PSALVKLIEI LNPQNKAGRI
401: TIITRMGAEN MRVKLPHLIR AVRRAGQIVT WVSDPMHGNT IKAPCGLKTR PFDSIRAEVR AFFDVHDQEG SHPGGVHLEM TGQNVTECIG GSRTVTFDDL
501: SSRYHTHCDP RLNASQSLEL SFIIAERLRK RRLGSQSTLG Q
101: QLPEYPDQEE LRSVLKTIDE FPPIVFAGEA RSLEERLGEA AMGRAFLLQG GDCAESFKEF NANNIRDTFR ILLQMGAVLM FGGQMPVIKV GRMAGQFAKP
201: RSDSFEEKDG VKLPSYRGDN VNGDAFDVKS RTPDPQRLIR AYCQSAATLN LLRAFATGGY AAMQRINQWN LDFTEHSEQG DRYRELASRV DEALGFMTAA
301: GLTMDHPIMK TTEFWTSHEC LLLPYEQSLT RRDSTSGLHY DCSAHFLWVG ERTRQLDGAH VEFLRGIANP LGIKVSDKMD PSALVKLIEI LNPQNKAGRI
401: TIITRMGAEN MRVKLPHLIR AVRRAGQIVT WVSDPMHGNT IKAPCGLKTR PFDSIRAEVR AFFDVHDQEG SHPGGVHLEM TGQNVTECIG GSRTVTFDDL
501: SSRYHTHCDP RLNASQSLEL SFIIAERLRK RRLGSQSTLG Q
001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL
Arabidopsis Description
Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.