CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16768	Soybean	endoplasmic reticulum, plastid	75.58	76.62
GSMUA_AchrUn_...	Banana	cytosol	25.97	75.71
KRH72380	Soybean	endoplasmic reticulum	76.55	74.25
Solyc11g009080.1.1	Tomato	plastid	72.09	72.8
VIT_00s0391g00070.t01	Wine grape	plastid	74.61	72.37
PGSC0003DMT400041818	Potato	plastid	71.32	72.02
PGSC0003DMT400041816	Potato	plastid	69.77	72.0
PGSC0003DMT400079161	Potato	plastid	75.19	71.72
VIT_18s0001g06250.t01	Wine grape	plastid	76.16	71.72
Solyc04g074480.2.1	Tomato	plastid	75.0	71.53
Bra011819.1-P	Field mustard	plastid	70.54	70.27
CDY69114	Canola	plastid	65.7	70.04
CDX69370	Canola	plastid	65.31	69.77
AT4G39980.1	Thale cress	plastid	70.35	69.14
KRH10562	Soybean	nucleus, plastid	16.47	17.17

Protein Annotations

KEGG:00400+2.5.1.54	EntrezGene:100809016	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EMBL:ACUP02003444	InterPro:Aldolase_TIM
InterPro:DAHP_synth_2	EnsemblPlantsGene:GLYMA_06G101700	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	UniProt:I1K9W3	InterPro:IPR013785	EnsemblPlants:KRH53034	ProteinID:KRH53034	ProteinID:KRH53034.1
PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164	SUPFAM:SSF51569	TIGRFAMs:TIGR01358
UniParc:UPI000233A78B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:8071618..8076229

Molecular Weight (calculated)

57606.1 Da

IEP (calculated)

8.115

GRAVY (calculated)

-0.341

Length

516 amino acids

Sequence
(BLAST)

001: MAATASNSLL CTKTLVPTLP SSSNNLNNSN LCSSFPRPRP RPIQALNNSV TVITDKKCEA KWVVDSWKSK KALQLPEYPE QEKLQSVLKS LEAFPPIVFA
101: GEARNLEERL AQASMGNAFL LQGGDCAESF KEFHANNIRD TFRLLLQMSV VTMFGAQVPV IKVGRMAGQF AKPRSEAFEE KDGVKLPSYR GDNVNGDAFE
201: EKTRIPDPER MIRSYSQSAA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYLELA RRIDETLGFM AAAGLTMDHP IMKTTEFWTS HECLLLPYEQ
301: SLTRLDSTSG LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KIDPKELIRL IEILNPQNKP GRITVITRMG AENTRAKLPH LIRGVRNAGL
401: IVCWVSDPMH GNTIKAPCGL KTRPFHSIME EVKSFFDVHE QEGSHPGGVH LEMTGQNVTE CIGGSKMVTF DDLSSRYNTH CDPRLNASQS LELAFIISER
501: LKKNRIGSNL NNVFSL

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.