CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69370	Canola	plastid	95.25	95.45
Bra011819.1-P	Field mustard	plastid	99.59	93.05
AT4G39980.1	Thale cress	plastid	89.88	82.86
PGSC0003DMT400041818	Potato	plastid	77.48	73.39
Solyc11g009080.1.1	Tomato	plastid	76.65	72.6
PGSC0003DMT400041816	Potato	plastid	73.55	71.2
VIT_00s0391g00070.t01	Wine grape	plastid	77.89	70.86
CDX87459	Canola	plastid	75.41	70.46
CDX88433	Canola	plastid	75.62	70.25
KRH16768	Soybean	endoplasmic reticulum, plastid	73.55	69.94
CDY21361	Canola	plastid	74.38	69.5
CDY04818	Canola	plastid	74.17	69.31
CDX68985	Canola	plastid	72.73	69.29
CDY41485	Canola	plastid	73.97	69.25
KRH72380	Soybean	endoplasmic reticulum	76.03	69.17
CDY68560	Canola	plastid	73.76	69.05
CDX75362	Canola	plastid	72.11	68.7
KRH53034	Soybean	plastid	70.04	65.7
GSMUA_AchrUn_...	Banana	cytosol	22.52	61.58

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078JQN4	UniProt:A0A078JQN4	InterPro:Aldolase_TIM
EnsemblPlants:CDY69114	ProteinID:CDY69114	ProteinID:CDY69114.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00083440001	InterPro:IPR013785	PFAM:PF01474
PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164	SUPFAM:SSF51569	UniPathway:UPA00053	UniParc:UPI0004EE25E3
SEG:seg	:	:	:	:	:

Description

BnaA01g34720DPhospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A078JQN4]

Coordinates

chrLK038676:-:463..2743

Molecular Weight (calculated)

53477.7 Da

IEP (calculated)

7.226

GRAVY (calculated)

-0.248

Length

484 amino acids

Sequence
(BLAST)

001: MALSNAASSS LSTRSLYTGL SHRHSHSNRQ SSIPFHRSVS LVTALHAADP SRNAAVSVKE SVSCALEWTP ESWKLKKALQ LPDYPDAGEL DSVLKTIEAF
101: PPIVFAGEAR NLEERLADAA VGKAFLLQGG DCAESFKEFN ATNIRDTFRV LLQMSIVLTF GGQVPVIKVG RMAGQFAKPR SDPFEEKDGS AATLNLLRAF
201: ATGGYAAIQR VTQWNLDFVE ESEQADRYQE LANRVDEALG FMSACGLTTD HPLMTTTDFY TSHECLLLPY EQSLTRLDST SGLYYDCSAH MVWCGERTRQ
301: LDGAHVEFLR GIANPLGIKV SNKMDPNELV KLVEILNPNN KPGRITVIVR MGAENMRVKL PHLIRAVRRS GQIVTWVCDP MHGNTIKAPC GLKTRAFDSI
401: LAEVRAFLDV HEQEGSHAGG IHLEMTGQNV TECIGGSRTV TYDDLSSRYH THCDPRLNAS QSLELAFIVA ERLRKRRTAT QRLS

Best Arabidopsis Sequence Match ( AT4G39980.1 )
(BLAST)

001: MALSNASSLS TRSIYGGDLS HRPSNRQSSF TFHPAVNTKP KSVNLVTAVH AAEPARNAVS VKESVASSSS GALKWTPESW KLKKALQLPD YPNANELESV
101: LKTIEAFPPI VFAGEARNLE ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA GQFAKPRSDA FEEKDGVKLP
201: SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF
301: YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK
401: LPHLIRAVRR SGQIVTWVCD PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT VTYDDLSSRY HTHCDPRLNA
501: SQSLELAFIV AERLRKRRTG SQRVS

Arabidopsis Description

DHS1Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P29976]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.