CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21361	Canola	plastid	99.23	99.23
Bra031389.1-P	Field mustard	plastid	99.03	99.03
CDY41485	Canola	plastid	93.24	93.42
CDY68560	Canola	plastid	92.66	92.84
AT1G22410.1	Thale cress	plastid	92.86	91.27
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	64.48	89.07
CDX88433	Canola	plastid	88.03	87.52
CDX87459	Canola	plastid	87.45	87.45
Zm00001d030369_P001	Maize	mitochondrion	17.37	83.33
Os08t0484500-01	Rice	plastid	77.22	79.21
GSMUA_Achr7P12720_001	Banana	cytosol	78.38	78.38
EES14335	Sorghum	plastid	76.64	78.15
HORVU2Hr1G029870.4	Barley	plastid	75.48	77.58
Os07t0622200-01	Rice	plastid	78.96	76.16
CDX68985	Canola	plastid	73.36	74.8
GSMUA_Achr1P21510_001	Banana	plastid	77.41	74.54
CDX69370	Canola	plastid	69.5	74.53
TraesCS2A01G163600.1	Wheat	golgi, plastid	76.83	74.53
TraesCS2B01G189300.1	Wheat	plastid	77.03	74.3
CDX75362	Canola	plastid	72.78	74.21
CDY69114	Canola	plastid	69.31	74.17
TraesCS2D01G170400.1	Wheat	plastid	76.45	74.02
Zm00001d022181_P004	Maize	plastid	76.45	73.61
EER99720	Sorghum	plastid	76.64	73.52
EER94760	Sorghum	plastid	77.8	73.14
Zm00001d006900_P004	Maize	plastid	75.48	72.81
Os03t0389700-01	Rice	plastid	77.41	72.25
Zm00001d044716_P001	Maize	cytosol	28.19	69.52
Zm00001d013618_P002	Maize	plastid	47.68	68.42
Solyc01g105390.2.1	Tomato	cytosol	24.52	66.84
Zm00001d029391_P002	Maize	plastid	70.46	66.36
Zm00001d052797_P002	Maize	extracellular	63.51	65.02
Zm00001d020059_P001	Maize	cytosol	28.57	61.92
Zm00001d037739_P001	Maize	plastid	26.45	56.38
Zm00001d017655_P001	Maize	plastid	20.27	40.23
KRH10562	Soybean	nucleus, plastid	15.06	15.76
Os10t0564400-01	Rice	plastid	14.29	14.57
Zm00001d031139_P001	Maize	plastid	6.18	14.55
TraesCS1D01G218300.1	Wheat	plastid	14.09	14.23
TraesCS1B01G229700.1	Wheat	plastid	13.71	13.84
HORVU1Hr1G055370.1	Barley	plastid	13.32	13.45
EER91915	Sorghum	plastid	12.93	13.43
HORVU0Hr1G000490.1	Barley	cytosol	11.39	11.24
Os08t0484400-01	Rice	mitochondrion, plastid	13.71	8.74
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	3.09	4.26

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078EYS6	InterPro:Aldolase_TIM	EnsemblPlants:CDY04818
ProteinID:CDY04818	ProteinID:CDY04818.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00119524001	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniPathway:UPA00053	UniParc:UPI0004EC068A	SEG:seg	:

Description

BnaC05g17710D

Coordinates

chrLK031957:-:1076121..1078898

Molecular Weight (calculated)

57469.8 Da

IEP (calculated)

8.089

GRAVY (calculated)

-0.332

Length

518 amino acids

Sequence
(BLAST)

001: MALMNGSLNL PSIYNHRQST FSPAAPRTTS LRISAVQTDP KPPSSSVTTP ATATKTVGVN VGKSKWSPES WKAKTALQQP EYPDVAELEA VLETIEAFPP
101: IVFAGEARLL EERLGQAAMG EAFLLQGGDC AESFKEFNAN NIRDTFRILL QMGAVLMFGG QVPVVKVGRM AGQFAKPRSD SFEERNGVKL PSYRGDNING
201: DAFDSKSRIP DPQRMIRAYC QSAATLNLLR AFATGGYAAM QRVTQWNLDF TEKSEQGDRY RELANRVDEA LGFMHAAGLT LDHPIMQTTD FWTSHECLLL
301: PYEQSLTRLD STSGLYYDCS AHMIWVGERT RQLDGAHVEF LRGVANPLGI KVSDKMDPKE LVKLIEILNA DNKPGRITII TRMGAENMRV KLPHLIRAVR
401: RAGQIVTWVS DPMHGNTIKA PCGLKTRPFD SILAEVRAFF DVHEQEGSHP GGVHLEMTGQ NVTECIGGSR TVTFDDLGSR YHTHCDPRLN ASQSLELSFI
501: IAERLRKRRI KSQQAFSI

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.