Factsheet for Os10t0564400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91915	Sorghum	plastid	81.3	82.77
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	61.22	82.71
TraesCS1B01G229700.1	Wheat	plastid	82.28	81.48
TraesCS1D01G218300.1	Wheat	plastid	82.09	81.29
HORVU1Hr1G055370.1	Barley	plastid	81.3	80.51
HORVU0Hr1G000490.1	Barley	cytosol	77.36	74.86
KRH10562	Soybean	nucleus, plastid	68.9	70.71
Os08t0484500-01	Rice	plastid	14.96	15.05
CDY68560	Canola	plastid	15.16	14.89
Os07t0622200-01	Rice	plastid	15.55	14.71
Bra016381.1-P	Field mustard	plastid	14.76	14.51
CDY41485	Canola	plastid	14.76	14.51
CDY04818	Canola	plastid	14.57	14.29
CDY21361	Canola	plastid	14.57	14.29
Bra031389.1-P	Field mustard	plastid	14.57	14.29
CDX88433	Canola	plastid	14.37	14.01
CDX87459	Canola	plastid	14.17	13.9
AT1G22410.1	Thale cress	plastid	14.37	13.85
Os03t0389700-01	Rice	plastid	14.76	13.51
Os08t0484400-01	Rice	mitochondrion, plastid	17.13	10.71
Bra035024.1-P	Field mustard	cytosol	13.98	9.57

Protein Annotations

KEGG:00400+2.5.1.54	MapMan:4.1.5.1.1	EntrezGene:4349410	ProteinID:ABB47993.1	EMBL:AK109667	ProteinID:BAF27248.1
ProteinID:BAT12094.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:Os10g0564400	EnsemblPlants:Os10t0564400-01	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF17
UniProt:Q336R7	SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniParc:UPI00005E1FAA	RefSeq:XP_015613306.1	SEG:seg

Description

Similar to Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2). (Os10t0564400-01)

Coordinates

chr10:-:22289945..22293566

Molecular Weight (calculated)

56408.5 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.331

Length

508 amino acids

Sequence
(BLAST)

001: MTCHSAMAAL TVGHAAIVHA TTRLEDARST GRRRRRRGMI TVRAAAAATS GWEPGSWRAR PARQIPEYPD AAALEGAERE LASFPPLVFA GEARKLEERL
101: GDAAMGRAFL LQGGDCAESF KEFAANNIRD TFRLMLQMAV VLTFGGQMPT IKVGRMAGQF AKPRSNPTET IDGVTLPSYR GDIINSDGFD EKSRAPDPER
201: LIRAYSQSAS TLNLLRGFAH GGYADLQRVT QWNLDFLRDS TQGDRYMELS ERVHDAIGFM VAAGLTPQHP IMTTAEFWTS HECLHLPYEQ ALTRVDSISG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI SNPLGVKVSD KLEPSELVKL CEILNPHNKP GRLTIITRMG AENTRVKLPH MIRAVRQAGL IVTWVSDPMH
401: GNTISAPCGL KTRSFDAIRC ELRAFFDVHE QEGSYPGGIH LEMTGQNVTE CIGGSKTVTL DDLSSRYRTH CDPRLNASQS LELAFAIADR LRKKRDRAWN
501: RLVYRAVA

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.