Factsheet for Bra035024.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87459	Canola	plastid	63.61	91.12
CDX88433	Canola	plastid	62.67	89.25
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	44.07	87.2
Bra031389.1-P	Field mustard	plastid	58.76	84.17
Bra011449.1-P	Field mustard	cytosol	50.4	83.48
Bra016381.1-P	Field mustard	plastid	57.82	82.98
Zm00001d030369_P001	Maize	mitochondrion	11.99	82.41
Os08t0484500-01	Rice	plastid	53.5	78.61
HORVU2Hr1G029870.4	Barley	plastid	52.56	77.38
EES14335	Sorghum	plastid	52.83	77.17
GSMUA_Achr7P12720_001	Banana	cytosol	53.1	76.06
Bra011819.1-P	Field mustard	plastid	52.56	75.29
Os07t0622200-01	Rice	plastid	54.04	74.67
Zm00001d022181_P004	Maize	plastid	53.37	73.61
EER99720	Sorghum	plastid	53.5	73.52
TraesCS2A01G163600.1	Wheat	golgi, plastid	52.83	73.41
TraesCS2B01G189300.1	Wheat	plastid	53.1	73.37
TraesCS2D01G170400.1	Wheat	plastid	52.83	73.27
GSMUA_Achr1P21510_001	Banana	plastid	52.29	72.12
Zm00001d006900_P004	Maize	plastid	52.02	71.88
Os03t0389700-01	Rice	plastid	53.5	71.53
Zm00001d044716_P001	Maize	cytosol	19.81	70.0
EER94760	Sorghum	plastid	51.75	69.69
Solyc01g105390.2.1	Tomato	cytosol	17.39	67.89
Zm00001d013618_P002	Maize	plastid	33.02	67.87
Zm00001d029391_P002	Maize	plastid	48.11	64.91
Zm00001d020059_P001	Maize	cytosol	20.08	62.34
Zm00001d052797_P002	Maize	extracellular	42.45	62.25
Zm00001d037739_P001	Maize	plastid	18.06	55.14
Zm00001d017655_P001	Maize	plastid	13.48	38.31
KRH10562	Soybean	nucleus, plastid	9.7	14.55
Os10t0564400-01	Rice	plastid	9.57	13.98
Zm00001d031139_P001	Maize	plastid	3.91	13.18
TraesCS1D01G218300.1	Wheat	plastid	9.03	13.06
HORVU1Hr1G055370.1	Barley	plastid	9.03	13.06
TraesCS1B01G229700.1	Wheat	plastid	8.76	12.67
EER91915	Sorghum	plastid	8.49	12.63
HORVU0Hr1G000490.1	Barley	cytosol	7.82	11.05
Os08t0484400-01	Rice	mitochondrion, plastid	8.89	8.13
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	2.02	3.99

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	Gene3D:3.30.70.330	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra035024
EnsemblPlants:Bra035024.1	EnsemblPlants:Bra035024.1-P	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0003849	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000504
InterPro:IPR012677	InterPro:IPR013785	UniProt:M4F1S7	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF01474
PFscan:PS50102	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360
SUPFAM:SSF51569	SUPFAM:SSF54928	TIGRFAMs:TIGR01358	UniParc:UPI0002541BED	SEG:seg	:

Description

AT1G22410 (E=1e-266) | 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative

Coordinates

chrA07:+:21830309..21838333

Molecular Weight (calculated)

82459.5 Da

IEP (calculated)

8.562

GRAVY (calculated)

-0.330

Length

742 amino acids

Sequence
(BLAST)

001: MSQTSYYRSP FGDTTYTKVF VGGLAWETPT EEMRRYFDQF GEILEAVIIT DKNTGKSKGY GFVTFREADS ATRAVAEPNP VIDGRKANCN IASFGRPRPS
101: PPRGRGQTGS PSQYQSGGPS AYTGMASPLP PAAAGHQLMY PSYGYTYNPD QFGYHQLLEC HTNIIIIFLN HITLNNIIIN GLLLLSSFTH PILLLHLHSK
201: DHYLLSLVYK YKHVLSLFNQ NDKTMALMYG GLNLPSTKPA IRHRQPFSSS ASRPAFLRIS AGIDPKNESI TSKTQAVKNP VGVSLSKSKW SPETWKAKTA
301: LQQPEYPDQK ELDSVLKTIE AFPPIVFAGE ARLLEERLGQ AAMGEAFLLQ GGDCAESFKE FNANNIRDTF RIILQMGAVL MFGGQVPVIK VGRMAGQFAK
401: PRSDSFEERD GVKLPSYRGD NINGDAFDAK SRIPDPQRMV SAYCQSAATL NLLRAFATGG YAAMQRVTQW NLDFAEHSEQ GDRYRELANR VDEALGFMHA
501: AGLTLDHPIM QTTDFWTSHE CLLLPYEQSL TRLDSTSGLY YDCSAHMVWV GERTRQLDGA HVEFLRGIAN PLGIKVSNKM DPAELVKLIE ILNPDNKPGR
601: ITIITRMGAE NMRVKLPHLI RAVRGAGQIV TWVSDPMHGN TIKAPCGLKT RPFDSILAEV RAFFDVHDQE GSHPGGIHLE MTGQNVTECI GGSRTVTFDD
701: LGSRYHTHCD PRLNASQSLE LSFVIAERLR KRRIKSQQAF AV

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.