Factsheet for TraesCS2D01G170400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G163600.1	Wheat	golgi, plastid	98.69	98.88
TraesCS2B01G189300.1	Wheat	plastid	97.2	96.83
HORVU2Hr1G029870.4	Barley	plastid	87.48	92.86
Zm00001d030369_P001	Maize	mitochondrion	17.94	88.89
EER99720	Sorghum	plastid	87.48	86.67
Zm00001d006900_P004	Maize	plastid	86.92	86.59
Zm00001d022181_P004	Maize	plastid	86.36	85.87
Os07t0622200-01	Rice	plastid	85.23	84.92
Zm00001d037739_P001	Maize	plastid	34.95	76.95
CDX87459	Canola	plastid	74.39	76.83
CDX88433	Canola	plastid	74.77	76.78
Bra031389.1-P	Field mustard	plastid	74.21	76.64
CDY21361	Canola	plastid	74.21	76.64
CDY04818	Canola	plastid	74.02	76.45
Bra016381.1-P	Field mustard	plastid	73.83	76.4
CDY41485	Canola	plastid	73.83	76.4
CDY68560	Canola	plastid	73.46	76.02
AT1G22410.1	Thale cress	plastid	74.58	75.71
Zm00001d044716_P001	Maize	cytosol	28.97	73.81
Zm00001d013618_P002	Maize	plastid	48.22	71.47
Solyc01g105390.2.1	Tomato	cytosol	22.99	64.74
Zm00001d020059_P001	Maize	cytosol	28.79	64.44
Zm00001d017655_P001	Maize	plastid	27.85	57.09
Bra035024.1-P	Field mustard	cytosol	73.27	52.83
TraesCS1D01G218300.1	Wheat	plastid	14.02	14.62

Protein Annotations

EnsemblPlants:TraesCS2D01G170400.1	EnsemblPlantsGene:TraesCS2D01G170400	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	InterPro:IPR013785	KEGG:00400+2.5.1.54	PANTHER:PTHR21337	PANTHER:PTHR21337:SF18
PFAM:PF01474	SEG:seg	SUPFAM:SSF51569	TIGRFAMs:TIGR01358	MapMan:4.1.5.1.1	:

Description

No Description!

Coordinates

chr2D:+:114532288..114535461

Molecular Weight (calculated)

58687.4 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.276

Length

535 amino acids

Sequence
(BLAST)

001: MALATNTAAA AAALTGGAAQ PRRAGFLPLK RRTISAVHAA DPARSGGASV PAAAAAKTSS PTVAPEAAAV TRPASWSVDS WRKKKALQLP EYPNKEELDA
101: VLKTIETFPP IVFAGEARHL EDRLAEAAMG RAFVLQGGDC AESFKEFNAN NIRDTFRVLL QMGAVLMFGG QVPVVKVGRM AGQFAKPRSD NFEEKDGVKL
201: PSYRGDNVNG DAFDLKSRTP DPDRMIRAYA QSVATLNLLR AFATGGYAAM QRVIQWNLDF MDHNEQGDRY RELAHRVDEA LGFMTAAGLG MDHPIMTTTD
301: FWTSHECLLL PYEQALTRED STSGLFYDCS AHMVWVGERT RQLDGAHVEF LRGIANPLGI KVSDKMNPAE LVKLIDILNP SNKPGRITII TRMGAENMRV
401: KLPHLIRAVR NSGQIVTWIT DPMHGNTIKA PCGLKTRPFD SIMNEVRAFF DVHDQEGSHP GGIHLEMTGQ NVTECIGGSR TVTFDDLGDR YHTHCDPRLN
501: ASQSLELAFI IAERLRKRRM KSGLTNNLPL PPLAF

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.