Factsheet for Zm00001d013618_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044716_P001	Maize	cytosol	47.09	80.95
Zm00001d030369_P001	Maize	mitochondrion	23.55	78.7
Solyc01g105390.2.1	Tomato	cytosol	33.24	63.16
Zm00001d020059_P001	Maize	cytosol	34.63	52.3
Zm00001d022181_P004	Maize	plastid	77.56	52.04
EER99720	Sorghum	plastid	76.73	51.3
HORVU2Hr1G029870.4	Barley	plastid	70.64	50.6
Zm00001d006900_P004	Maize	plastid	74.79	50.28
Os07t0622200-01	Rice	plastid	74.52	50.09
TraesCS2A01G163600.1	Wheat	golgi, plastid	71.47	48.31
CDX87459	Canola	plastid	69.25	48.26
TraesCS2D01G170400.1	Wheat	plastid	71.47	48.22
TraesCS2B01G189300.1	Wheat	plastid	71.47	48.04
CDX88433	Canola	plastid	69.25	47.98
Bra016381.1-P	Field mustard	plastid	68.42	47.78
CDY68560	Canola	plastid	68.42	47.78
CDY41485	Canola	plastid	68.42	47.78
CDY21361	Canola	plastid	68.42	47.68
CDY04818	Canola	plastid	68.42	47.68
Bra031389.1-P	Field mustard	plastid	68.42	47.68
AT1G22410.1	Thale cress	plastid	68.98	47.25
Zm00001d029391_P002	Maize	plastid	65.1	42.73
Zm00001d037739_P001	Maize	plastid	24.93	37.04
Zm00001d052797_P002	Maize	extracellular	48.75	34.78
Bra035024.1-P	Field mustard	cytosol	67.87	33.02
Zm00001d017655_P001	Maize	plastid	6.65	9.2
Zm00001d031139_P001	Maize	plastid	4.16	6.82

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	UniProt:A0A1D6GL06	ProteinID:AQK64006.1	InterPro:Aldolase_TIM
InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF18	SUPFAM:SSF51569	UniParc:UPI0008453361
EnsemblPlantsGene:Zm00001d013618	EnsemblPlants:Zm00001d013618_P002	EnsemblPlants:Zm00001d013618_T002	SEG:seg	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 2 chloroplastic

Coordinates

chr5:+:15623823..15627865

Molecular Weight (calculated)

40285.3 Da

IEP (calculated)

7.782

GRAVY (calculated)

-0.419

Length

361 amino acids

Sequence
(BLAST)

001: MSPREGLSAA SSSTRGQHGR VDDMLACIDA CICQFALQVC AMPEEGRPSR RETDCKNGTA KQAKISFFLD QEQVGRMASQ FAKPRSEPLE ERDDVKLPSY
101: RGDNVNGDDF TEKSRVPDPQ RMIRAYSQSV ATLNLLRVLA TGAYAAMQRV TQWNLDFMDP SEQGDRYREL AHRVDEALGF MTAAGLTVSD KMNPSDLVKL
201: IEILNPSNKP GRIIIITRMG AENMRVKLPH LIRVVRNAGL IVTWITDPMH GNTIKAPCGL KTRPFDSILA EVRAFFDMHD QEGSHPGGIH LEMTGQNVTE
301: CIGGSRTVTF DDLSDRYHTH CDPRLNASQS LELAFIIAER LRKRRMRSGL NNSLPLPPLA F

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.