Factsheet for Zm00001d030369_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037739_P001	Maize	plastid	95.37	42.39
Zm00001d020059_P001	Maize	cytosol	79.63	35.98
Zm00001d013618_P002	Maize	plastid	78.7	23.55
Zm00001d006900_P004	Maize	plastid	96.3	19.37
HORVU2Hr1G029870.4	Barley	plastid	88.89	19.05
Zm00001d022181_P004	Maize	plastid	92.59	18.59
Os07t0622200-01	Rice	plastid	89.81	18.06
TraesCS2A01G163600.1	Wheat	golgi, plastid	88.89	17.98
TraesCS2D01G170400.1	Wheat	plastid	88.89	17.94
TraesCS2B01G189300.1	Wheat	plastid	88.89	17.88
AT1G22410.1	Thale cress	plastid	85.19	17.46
Bra016381.1-P	Field mustard	plastid	83.33	17.41
CDY41485	Canola	plastid	83.33	17.41
CDY21361	Canola	plastid	83.33	17.37
CDY04818	Canola	plastid	83.33	17.37
Bra031389.1-P	Field mustard	plastid	83.33	17.37
CDY68560	Canola	plastid	82.41	17.21
CDX87459	Canola	plastid	82.41	17.18
CDX88433	Canola	plastid	82.41	17.08
Zm00001d052797_P002	Maize	extracellular	78.7	16.8
Zm00001d029391_P002	Maize	plastid	75.93	14.91
Bra035024.1-P	Field mustard	cytosol	82.41	11.99
Zm00001d031139_P001	Maize	plastid	13.89	6.82
Zm00001d017655_P001	Maize	plastid	13.89	5.75
Zm00001d044716_P001	Maize	cytosol	3.7	1.9
Solyc01g105390.2.1	Tomato	cytosol	2.78	1.58

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:50.2.5	UniProt:A0A1D6KCA8	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2
GO:GO:0003674	GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009423	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785
ProteinID:ONM00903.1	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	SUPFAM:SSF51569	UniParc:UPI0008452675
EnsemblPlantsGene:Zm00001d030369	EnsemblPlants:Zm00001d030369_P001	EnsemblPlants:Zm00001d030369_T001	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 2 chloroplastic

Coordinates

chr1:-:126770594..126771011

Molecular Weight (calculated)

12106.5 Da

IEP (calculated)

8.991

GRAVY (calculated)

-0.481

Length

108 amino acids

Sequence
(BLAST)

001: MGVVLMFGGQ VLVVKVGRMA GQFAKPRSEP FEEKDGVKLP SYRGDNVNGD DFTEKSRVPD PQRMIRAYAQ SVATLNLLRA FATGGYAAMQ RVTQWNLDFM
101: DHHEQGDR

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.