CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88433	Canola	plastid	97.3	96.74
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	63.32	87.47
CDY04818	Canola	plastid	87.45	87.45
CDY21361	Canola	plastid	87.45	87.45
CDY41485	Canola	plastid	85.71	85.88
CDY68560	Canola	plastid	85.71	85.88
Zm00001d030369_P001	Maize	mitochondrion	17.18	82.41
Os08t0484500-01	Rice	plastid	76.45	78.42
HORVU2Hr1G029870.4	Barley	plastid	76.25	78.37
EES14335	Sorghum	plastid	76.06	77.56
GSMUA_Achr7P12720_001	Banana	cytosol	76.64	76.64
CDX75362	Canola	plastid	74.32	75.79
Os07t0622200-01	Rice	plastid	78.19	75.42
CDY69114	Canola	plastid	70.46	75.41
CDX68985	Canola	plastid	73.75	75.2
CDX69370	Canola	plastid	70.08	75.16
TraesCS2B01G189300.1	Wheat	plastid	77.41	74.67
TraesCS2A01G163600.1	Wheat	golgi, plastid	76.83	74.53
TraesCS2D01G170400.1	Wheat	plastid	76.83	74.39
EER99720	Sorghum	plastid	77.22	74.07
Zm00001d022181_P004	Maize	plastid	76.83	73.98
GSMUA_Achr1P21510_001	Banana	plastid	75.87	73.05
Zm00001d006900_P004	Maize	plastid	75.1	72.44
Os03t0389700-01	Rice	plastid	76.06	70.99
EER94760	Sorghum	plastid	75.48	70.96
Zm00001d044716_P001	Maize	cytosol	28.57	70.48
Zm00001d013618_P002	Maize	plastid	48.26	69.25
Solyc01g105390.2.1	Tomato	cytosol	24.9	67.89
Zm00001d029391_P002	Maize	plastid	70.08	66.0
Zm00001d052797_P002	Maize	extracellular	62.36	63.83
Bra035024.1-P	Field mustard	cytosol	91.12	63.61
Zm00001d020059_P001	Maize	cytosol	28.76	62.34
Zm00001d037739_P001	Maize	plastid	26.25	55.97
Zm00001d017655_P001	Maize	plastid	19.69	39.08
KRH10562	Soybean	nucleus, plastid	14.67	15.35
Zm00001d031139_P001	Maize	plastid	6.37	15.0
Os10t0564400-01	Rice	plastid	13.9	14.17
TraesCS1D01G218300.1	Wheat	plastid	13.71	13.84
TraesCS1B01G229700.1	Wheat	plastid	13.32	13.45
HORVU1Hr1G055370.1	Barley	plastid	13.13	13.26
EER91915	Sorghum	plastid	12.74	13.23
HORVU0Hr1G000490.1	Barley	cytosol	11.2	11.05
Os08t0484400-01	Rice	mitochondrion, plastid	13.13	8.37
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	2.9	3.99

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078DGD4	InterPro:Aldolase_TIM	EnsemblPlants:CDX87459
ProteinID:CDX87459	ProteinID:CDX87459.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00146440001	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniPathway:UPA00053	UniParc:UPI0004EEB9E8	:	:

Description

BnaA07g34140D

Coordinates

chrLK031850:-:713462..715979

Molecular Weight (calculated)

57446.8 Da

IEP (calculated)

8.290

GRAVY (calculated)

-0.328

Length

518 amino acids

Sequence
(BLAST)

001: MALMYGGLNL PSTKPAIRHR QPFSSSASRP AFLRISAGID PKNESITSKT QAVKNPVGVS LSKSKWSPET WKAKTALQQP EYPDQKELDS VLKTIEAFPP
101: IVFAGEARLL EERLGQAAMG EAFLLQGGDC AESFKEFNAN NIRDTFRIIL QMGAVLMFGG QVPVIKVGRM AGQFAKPRSD SFEERDGVKL PSYRGDNING
201: DAFDAKSRIP DPQRMVSAYC QSAATLNLLR AFATGGYAAM QRVTQWNLDF AEHSEQGDRY RELANRVDEA LGFMHAAGLT LDHPIMQTTD FWTSHECLLL
301: PYEQSLTRLD STSGLYYDCS AHMVWVGERT RQLDGAHVEF LRGIANPLGI KVSNKMDPAE LVKLIEILNP DNKPGRITII TRMGAENMRV KLPHLIRAVR
401: GAGQIVTWVS DPMHGNTIKA PCGLKTRPFD SILAEVRAFF DVHDQEGSHP GGIHLEMTGQ NVTECIGGSR TVTFDDLGSR YHTHCDPRLN ASQSLELSFV
501: IAERLRKRRI KSQQAFAV

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.